RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 M0R2Z0 102 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 UPK1AO00322 258 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 SLC22A1O15245 554 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 TCF21O43680 179 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 TNFSF13O75888 250 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 PIAS1O75925 651 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 IFNA7P01567 189 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 BGLAPP02818 100 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 CTSEP14091 401 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 PPIBP23284 216 aaKnown RBP2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 RPS3P23396 243 aaKnown RBP eCLIP2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 CNTFRP26992 372 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 GABRA3P34903 492 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 PSMB3P49720 205 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 LHX2P50458 406 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 POLR2HP52434 150 aaKnown RBP2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 GABARAPL2P60520 117 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 RAP1AP62834 184 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 HERVK_113P63121 156 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 CRADDP78560 199 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 BIKQ13323 160 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 MMDQ15546 238 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 TAF9Q16594 264 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 GLYATQ6IB77 296 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 RFLNAQ6ZTI6 216 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 TMEM86AQ8N2M4 240 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 DRAM1Q8N682 238 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 KRTCAP2Q8N6L1 136 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 TMEM75Q8N9X5 138 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 SLC30A7Q8NEW0 376 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 OR52P1PQ8NH57 321 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 STARD4Q96DR4 205 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 NARS2Q96I59 477 aaKnown RBP2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 KCNS1Q96KK3 526 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 LINC00167Q96N53 147 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 IP6K3Q96PC2 410 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 NMNAT3Q96T66 252 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 HSD17B10Q99714 261 aaKnown RBP2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 SMIM3Q9BZL3 60 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 ZNF436Q9C0F3 470 aaPredicted RBP2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 CXorf21Q9HAI6 301 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 POPDC3Q9HBV1 291 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 GPR84Q9NQS5 396 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 KCNIP2Q9NS61 270 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 DHCR7Q9UBM7 475 aaKnown RBP2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 DENND4BO75064 1496 aaPredicted RBP2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 CHD2O14647 1828 aaKnown RBP2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 WDR62O43379 1518 aa2.63□□□□□ -1.99
CALCOCO2-220ENST00000511816 MED23Q9ULK4 1368 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 VPS8Q8N3P4 1428 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 IGKV6D-21A0A0A0MT36 114 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 TMED7-TICAM2A0A0A6YYA0 188 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 IGHV1-69-2A0A0G2JMI3 117 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 NDUFC2-KCTD14E9PQ53 114 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 KRTAP4-16G5E9R7 235 aaPredicted RBP2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 LGALS9O00182 355 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 ISLRO14498 428 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 TP53I11O14683 189 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 TRAF3IP2O43734 574 aaPredicted RBP2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 SLC37A4O43826 429 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 GGCTO75223 188 aaKnown RBP2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 GABARAPO95166 117 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 ZNF682O95780 498 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 HLA-DPB1P04440 258 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 HLA-DQB2P05538 268 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 ADRA2AP08913 450 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 ZNF806P0C7X5 589 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 SMIM17P0DL12 118 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 ZNF30P17039 623 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 IL3RAP26951 378 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 IMPA1P29218 277 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 OR10J1P30954 320 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 RPL35P42766 123 aaKnown RBP2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 INPP1P49441 399 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 TAS2R30P59541 319 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 NCS1P62166 190 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 GNA12Q03113 381 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 CAV1Q03135 178 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 CCL15Q16663 113 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 MORN2Q502X0 79 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 TIFABQ6ZNK6 161 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 SHISA6Q6ZSJ9 500 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 OR8I2Q8N0Y5 310 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 NPBQ8NG41 125 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 OR1J4Q8NGS1 313 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 FRZBQ92765 325 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 ADAT3Q96EY9 351 aaPredicted RBP2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 PPP3R2Q96LZ3 170 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 TIMM17AQ99595 171 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 YIPF3Q9GZM5 350 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 LPAR5Q9H1C0 372 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 GTSF1LQ9H1H1 148 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 MED28Q9H204 178 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 LAMTOR3Q9UHA4 124 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 ERG28Q9UKR5 140 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 TRAPPC2LQ9UL33 140 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 LAMTOR2Q9Y2Q5 125 aa2.62□□□□□ -1.99
CALCOCO2-220ENST00000511816 IBTKQ9P2D0 1353 aaPredicted RBP2.61□□□□□ -1.99
CALCOCO2-220ENST00000511816 SSH2Q76I76 1423 aa2.61□□□□□ -1.99
CALCOCO2-220ENST00000511816 DUXBA0A1W2PPF3 345 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms