RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 TP53RKQ96S44 253 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 RTBDNQ9BSG5 229 aaPredicted RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 FAM103A1Q9BTL3 118 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 MEGF9Q9H1U4 602 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 DPAGT1Q9H3H5 408 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 COPZ2Q9P299 210 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 SCP2D1Q9UJQ7 156 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 C14orf166Q9Y224 244 aaKnown RBP4.31□□□□□ -1.72
PROM1-211ENST00000511153 NSG2Q9Y328 171 aa4.31□□□□□ -1.72
PROM1-211ENST00000511153 TET2Q6N021 2002 aaPredicted RBP4.3□□□□□ -1.72
PROM1-211ENST00000511153 TRAV3A0A0B4J244 114 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 FAM240BA0A1B0GVZ2 78 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 IFNA2P01563 188 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 CRYBA1P05813 215 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 OR5AC1P0C628 307 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 FAM106CPP0CH98 169 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 VSIG10L2P0DP72 767 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 MDKP21741 143 aaPredicted RBP4.3□□□□□ -1.72
PROM1-211ENST00000511153 THBS3P49746 956 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 ARHGDIBP52566 201 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 OR2B8PP59922 312 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 DEFA5Q01523 94 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 EIF4EBP1Q13541 118 aaPredicted RBP4.3□□□□□ -1.72
PROM1-211ENST00000511153 TRIM16LQ309B1 348 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 C10orf55Q5SWW7 151 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 C11orf87Q6NUJ2 197 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 C10orf99Q6UWK7 81 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 C19orf35Q6ZS72 473 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 SLC38A6Q8IZM9 456 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 ARRDC1Q8N5I2 433 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 TEX29Q8N6K0 151 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 C8orf31Q8N9H6 132 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 OR2T10Q8NGZ9 312 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 TMEM230Q96A57 120 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 NOL4LQ96MY1 436 aaPredicted RBP4.3□□□□□ -1.72
PROM1-211ENST00000511153 PRRT1Q99946 306 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 HSPB9Q9BQS6 159 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 SEC22CQ9BRL7 303 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 CCDC32Q9BV29 185 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 C5orf66Q9H5L9 145 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 SLC2A9Q9NRM0 540 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 RABL2AQ9UBK7 228 aaPredicted RBP4.3□□□□□ -1.72
PROM1-211ENST00000511153 METTL1Q9UBP6 276 aaKnown RBP4.3□□□□□ -1.72
PROM1-211ENST00000511153 VPREB3Q9UKI3 123 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 RABL2BQ9UNT1 228 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 GAB2Q9UQC2 676 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 WASHC3Q9Y3C0 194 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 TNCP24821 2201 aa4.3□□□□□ -1.72
PROM1-211ENST00000511153 FBN1P35555 2871 aaKnown RBP4.29□□□□□ -1.72
PROM1-211ENST00000511153 CENPXA8MT69 81 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 RNF212BA8MTL3 300 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 J3KRW8 73 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 MPPED1O15442 326 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 TPPPO94811 219 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 KRASP01116 189 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 IGKV1-39P01597 117 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 IGKV1D-39P04432 117 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 AMY1AP04745 511 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 CTSDP07339 412 aaPredicted RBP4.29□□□□□ -1.72
PROM1-211ENST00000511153 CD1BP29016 333 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 ZNF137PP52743 207 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 BPIFB3P59826 476 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 SSBP1Q04837 148 aaKnown RBP4.29□□□□□ -1.72
PROM1-211ENST00000511153 PSG5Q15238 335 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 RTL8BQ17RB0 113 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 ZNF585BQ52M93 769 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 LY6G6FQ5SQ64 297 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 LCNL1Q6ZST4 164 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 Q6ZSV7 163 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 NRARPQ7Z6K4 114 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 CMTM1Q8IZ96 169 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 Q8N9W7 124 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 DMBX1Q8NFW5 382 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 OR5AN1Q8NGI8 311 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 GRPEL2Q8TAA5 225 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 ENKURQ8TC29 256 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 DDB2Q92466 427 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 BORCS5Q969J3 196 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 FLYWCH2Q96CP2 140 aaKnown RBP4.29□□□□□ -1.72
PROM1-211ENST00000511153 RBM14Q96PK6 669 aaKnown RBP4.29□□□□□ -1.72
PROM1-211ENST00000511153 RASL11BQ9BPW5 248 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 HINT2Q9BX68 163 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 TOLLIPQ9H0E2 274 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 C20orf85Q9H1P6 137 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 RANBP3Q9H6Z4 567 aaPredicted RBP4.29□□□□□ -1.72
PROM1-211ENST00000511153 PARP11Q9NR21 331 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 PLSCR3Q9NRY6 295 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 NUDT15Q9NV35 164 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 C1RLQ9NZP8 487 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 GPR132Q9UNW8 380 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 MOB4Q9Y3A3 225 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 WSB1Q9Y6I7 421 aa4.29□□□□□ -1.72
PROM1-211ENST00000511153 A0A0G2JRQ6 117 aa4.28□□□□□ -1.72
PROM1-211ENST00000511153 C3orf85A0A1B0GTC6 90 aa4.28□□□□□ -1.72
PROM1-211ENST00000511153 A0A1W2PRX2 142 aa4.28□□□□□ -1.72
PROM1-211ENST00000511153 FAM90A9PA6NNJ1 464 aa4.28□□□□□ -1.72
PROM1-211ENST00000511153 OOSP1A8MZH6 123 aa4.28□□□□□ -1.72
PROM1-211ENST00000511153 TRIM77I1YAP6 450 aa4.28□□□□□ -1.72
PROM1-211ENST00000511153 ITGB1BP1O14713 200 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms