RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 LINC01555Q8NAE3 123 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 OR11H12B2RN74 326 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 H0YL77 283 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 IGHV3-9P01782 118 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 OR11H1Q8NG94 326 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 OR11H2Q8NH07 326 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 UBTD1Q9HAC8 227 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 METTL12A8MUP2 240 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 H3BRM9 83 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 UBE2V1Q13404 147 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 ZNF502Q8TBZ5 544 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 GPR146Q96CH1 333 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 TCTN1Q2MV58 587 aa7.24□□□□□ -1.25
HTT-208ENST00000510626 C11orf68Q9H3H3 251 aaKnown RBP7.24□□□□□ -1.25
HTT-208ENST00000510626 TAF1LQ8IZX4 1826 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 F12P00748 615 aaPredicted RBP7.23□□□□□ -1.25
HTT-208ENST00000510626 OR9G9P0C7N8 305 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 OR11H4Q8NGC9 324 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 SSBP4Q9BWG4 385 aaPredicted RBP7.23□□□□□ -1.25
HTT-208ENST00000510626 CSPG4Q6UVK1 2322 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 HSPE1P61604 102 aaKnown RBP7.23□□□□□ -1.25
HTT-208ENST00000510626 DCAF10Q5QP82 559 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 SPATA46Q5T0L3 261 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 TMEM78Q5T7P6 136 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 CD5P06127 495 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 NR2C2APQ86WQ0 139 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 ABHD3Q8WU67 409 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 ZNF708P17019 499 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 CITED1Q99966 193 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 TRBV20-1A0A075B6N2 111 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 DEFB108AA8MXU0 73 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 WNT9BO14905 357 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 KLK2P20151 261 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 PRNTQ86SH4 94 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 TM2D1Q9BX74 207 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 G6PC2Q9NQR9 355 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 GCHFRP30047 84 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 PTGDSP41222 190 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 DEFB103AP81534 67 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 NXT2Q9NPJ8 142 aaKnown RBP7.23□□□□□ -1.25
HTT-208ENST00000510626 ACACBO00763 2458 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 HSD52Q0P140 79 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 GPR183P32249 361 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 OR4D11Q8NGI4 311 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 ARPC1AQ92747 370 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 GREB1LQ9C091 1923 aaPredicted RBP7.23□□□□□ -1.25
HTT-208ENST00000510626 HYAL3O43820 417 aaPredicted RBP7.23□□□□□ -1.25
HTT-208ENST00000510626 OTPQ5XKR4 325 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 LY75O60449 1722 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 RAMP1O60894 148 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 CEACAM1P13688 526 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 CTGFP29279 349 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 FAM90A1Q86YD7 464 aa7.23□□□□□ -1.25
HTT-208ENST00000510626 SLC25A10Q9UBX3 287 aaPredicted RBP7.23□□□□□ -1.25
HTT-208ENST00000510626 MEX3AA1L020 520 aaKnown RBP7.22□□□□□ -1.25
HTT-208ENST00000510626 PSG6Q00889 435 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 WFDC8Q8IUA0 241 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 A0A1B0GUT8 65 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 OR8B2Q96RD0 313 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 DYSFO75923 2080 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 PAPPA2Q9BXP8 1791 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 TMEM50AO95807 157 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 ERVK11-1P61568 191 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 FAM53AQ6NSI3 398 aaPredicted RBP7.22□□□□□ -1.25
HTT-208ENST00000510626 C2CD3Q4AC94 2353 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 DLEU1O43261 78 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 THY1P04216 161 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 CISD3P0C7P0 127 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 P2RY6Q15077 328 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 FBLN7Q53RD9 439 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 YAE1D1Q9NRH1 226 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 C6orf106Q9H6K1 298 aaPredicted RBP7.22□□□□□ -1.25
HTT-208ENST00000510626 A0A1B0GTI1 187 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 UPK3AO75631 287 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 MARCH11A6NNE9 402 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 CCL11P51671 97 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 NANOS3P60323 173 aaKnown RBP7.22□□□□□ -1.25
HTT-208ENST00000510626 OR4D5Q8NGN0 318 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 RAXQ9Y2V3 346 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 FGF16O43320 207 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 BHLHA9Q7RTU4 235 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 ELOVL5Q9NYP7 299 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 TMEM14DPA8MWL7 114 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 DUSP2Q05923 314 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 FBXW9Q5XUX1 488 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 TUSC5Q8IXB3 177 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 CIARTQ8N365 385 aaPredicted RBP7.22□□□□□ -1.25
HTT-208ENST00000510626 OR4C13Q8NGP0 309 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 OR10J6PQ8NGY7 276 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 RLN3Q8WXF3 142 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 SF3B6Q9Y3B4 125 aaKnown RBP7.22□□□□□ -1.25
HTT-208ENST00000510626 LINC00587B1AMM8 73 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 SNAI3Q3KNW1 292 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 SLC25A48Q6ZT89 311 aaKnown RBP7.22□□□□□ -1.25
HTT-208ENST00000510626 FGFRL1Q8N441 504 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 SGK494Q96LW2 274 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 NPCDR1Q9BY65 106 aa7.22□□□□□ -1.25
HTT-208ENST00000510626 TMEM177Q53S58 311 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms