RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 C1QBP02746 253 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 IGHV4-34P06331 123 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 DBIP07108 87 aaKnown RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 UBBP0CG47 229 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 MPC1LP0DKB6 136 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 ZNF708P17019 499 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 ZNF25P17030 456 aaPredicted RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 SPI1P17947 270 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 NELFEP18615 380 aaKnown RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 CDK2P24941 298 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 DDTP30046 118 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 REG1BP48304 166 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 RND2P52198 227 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 SLC18A1P54219 525 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 H2BFSP57053 126 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 RRAS2P62070 204 aaPredicted RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 HBG1P69891 147 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 HBG2P69892 147 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 PRDX1Q06830 199 aaKnown RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 EBPQ15125 230 aaKnown RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 TTC32Q5I0X7 151 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 TMEM255AQ5JRV8 349 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 AKR1C8PQ5T2L2 129 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 C11orf71Q6IPW1 123 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 PLET1Q6UQ28 207 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 UGT2A3Q6UWM9 527 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 ALKAL1Q6UXT8 129 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 Q6ZN92 141 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 ZNF550Q7Z398 422 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 NEGR1Q7Z3B1 354 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 NAA40Q86UY6 237 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 UBALD2Q8IYN6 164 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 NPWQ8N729 165 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 CHST4Q8NCG5 386 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 OR9I1Q8NGQ6 314 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 OR13C4Q8NGS5 318 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 OR10D3Q8NH80 312 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 OR1S1Q8NH92 325 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 CANT1Q8WVQ1 401 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 APOBEC3DQ96AK3 386 aaPredicted RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 RPUSD4Q96CM3 377 aaKnown RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 FMC1Q96HJ9 113 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 FAM19A4Q96LR4 140 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 DOHHQ9BU89 302 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 SRXN1Q9BYN0 137 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 TBL1XR1Q9BZK7 514 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 SELENOIQ9C0D9 397 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 OR51E2Q9H255 320 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 RSL24D1Q9UHA3 163 aaKnown RBP2.63□□□□□ -1.99
NUP54-209ENST00000510569 PRNDQ9UKY0 176 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 ST3GAL6Q9Y274 331 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 COQ4Q9Y3A0 265 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 UBIAD1Q9Y5Z9 338 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 PHIPQ8WWQ0 1821 aa2.63□□□□□ -1.99
NUP54-209ENST00000510569 TRAV39A0A0B4J263 110 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 A0A0B4J2A0 478 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 GMNCA6NCL1 334 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 H7C1H1 209 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 J3KT08 172 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 GGCTO75223 188 aaKnown RBP2.62□□□□□ -1.99
NUP54-209ENST00000510569 CDRT1O95170 752 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 AIFM1O95831 613 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 IGHV3-48P01763 117 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 REG1AP05451 166 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 OR8U8P0C7N1 319 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 RBMY1CP0DJD4 496 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 CXCL3P19876 107 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 AGTR1P30556 359 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 RPL29P47914 159 aaKnown RBP2.62□□□□□ -1.99
NUP54-209ENST00000510569 NCALDP61601 193 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 SNRPFP62306 86 aaKnown RBP2.62□□□□□ -1.99
NUP54-209ENST00000510569 SELENOTP62341 195 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 RAP1AP62834 184 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 RPS28P62857 69 aaKnown RBP2.62□□□□□ -1.99
NUP54-209ENST00000510569 PMAIP1Q13794 54 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 OR8B8Q15620 311 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 CNIH2Q6PI25 160 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 HAGHLQ6PII5 290 aaPredicted RBP2.62□□□□□ -1.99
NUP54-209ENST00000510569 AGTRAPQ6RW13 159 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 UNQ9370/PRO34162Q6UXP9 181 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 SCGB1D4Q6XE38 83 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 ZFP2Q6ZN57 461 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 GOLT1AQ6ZVE7 132 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 H2AFVQ71UI9 128 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 C17orf82Q86X59 251 aaPredicted RBP2.62□□□□□ -1.99
NUP54-209ENST00000510569 FAM24BQ8N5W8 94 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 GPR26Q8NDV2 337 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 SLC30A7Q8NEW0 376 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 GNPDA2Q8TDQ7 276 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 GPR119Q8TDV5 335 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 NARS2Q96I59 477 aaKnown RBP2.62□□□□□ -1.99
NUP54-209ENST00000510569 SLC35G5Q96KT7 338 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 PGLYRP4Q96LB8 373 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 BMFQ96LC9 184 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 PPP3R2Q96LZ3 170 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 LINC00477Q96M19 166 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 RNF157Q96PX1 679 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 OR7D2Q96RA2 312 aa2.62□□□□□ -1.99
NUP54-209ENST00000510569 METTL26Q96S19 204 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms