RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 HOGA1Q86XE5 327 aa17.66■□□□□ 0.42
SNF8-209ENST00000510558 HSD17B10Q99714 261 aaKnown RBP17.66■□□□□ 0.42
SNF8-209ENST00000510558 AUNIPQ9H7T9 357 aa17.66■□□□□ 0.42
SNF8-209ENST00000510558 ZNF430Q9H8G1 570 aaPredicted RBP17.66■□□□□ 0.42
SNF8-209ENST00000510558 RANGRFQ9HD47 186 aaPredicted RBP17.66■□□□□ 0.42
SNF8-209ENST00000510558 DIABLOQ9NR28 239 aa17.66■□□□□ 0.42
SNF8-209ENST00000510558 ANKRD34BA5PLL1 514 aa17.65■□□□□ 0.42
SNF8-209ENST00000510558 CREBL2O60519 120 aaPredicted RBP17.65■□□□□ 0.42
SNF8-209ENST00000510558 EIF4EBP1Q13541 118 aaPredicted RBP17.65■□□□□ 0.42
SNF8-209ENST00000510558 TCTEX1D2Q8WW35 142 aa17.65■□□□□ 0.42
SNF8-209ENST00000510558 A0A087WXM4 84 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 MPPED1O15442 326 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 AIREO43918 545 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 PTHLHP12272 177 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 SPNP16150 400 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 ZP3P21754 424 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 MMD2Q8IY49 270 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 ADAD2Q8NCV1 583 aaKnown RBP17.64■□□□□ 0.41
SNF8-209ENST00000510558 TSPAN14Q8NG11 270 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 OR6Q1Q8NGQ2 317 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 OR4S2Q8NH73 311 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 YIPF6Q96EC8 236 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 OR4C12Q96R67 309 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 VCX3AQ9NNX9 186 aa17.64■□□□□ 0.41
SNF8-209ENST00000510558 ACTL6BO94805 426 aa17.63■□□□□ 0.41
SNF8-209ENST00000510558 TNFAIP8O95379 198 aa17.63■□□□□ 0.41
SNF8-209ENST00000510558 OR9G9P0C7N8 305 aa17.63■□□□□ 0.41
SNF8-209ENST00000510558 NHLRC4P0CG21 123 aaPredicted RBP17.63■□□□□ 0.41
SNF8-209ENST00000510558 FCGR2CP31995 323 aa17.63■□□□□ 0.41
SNF8-209ENST00000510558 DYRK1AQ13627 763 aa17.63■□□□□ 0.41
SNF8-209ENST00000510558 CROCCP3Q8IVE0 287 aa17.63■□□□□ 0.41
SNF8-209ENST00000510558 MFSD4AQ8N468 514 aa17.63■□□□□ 0.41
SNF8-209ENST00000510558 SECTM1Q8WVN6 248 aa17.63■□□□□ 0.41
SNF8-209ENST00000510558 TAS2R8Q9NYW2 309 aa17.63■□□□□ 0.41
SNF8-209ENST00000510558 FCER2P06734 321 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 LSM3P62310 102 aaKnown RBP17.62■□□□□ 0.41
SNF8-209ENST00000510558 C10orf55Q5SWW7 151 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 ZNF343Q6P1L6 599 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 ZNF66Q6ZN08 573 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 VKORC1L1Q8N0U8 176 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 OR13F1Q8NGS4 319 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 USMG5Q96IX5 58 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 GPHA2Q96T91 129 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 ELOVL1Q9BW60 279 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 SMAD5-AS1Q9Y6J3 95 aa17.62■□□□□ 0.41
SNF8-209ENST00000510558 RBMXL2O75526 392 aaKnown RBP17.61■□□□□ 0.41
SNF8-209ENST00000510558 RPS19P39019 145 aaKnown RBP17.61■□□□□ 0.41
SNF8-209ENST00000510558 CBX5P45973 191 aa17.61■□□□□ 0.41
SNF8-209ENST00000510558 BRWD1-AS2P59051 145 aa17.61■□□□□ 0.41
SNF8-209ENST00000510558 MSMO1Q15800 293 aa17.61■□□□□ 0.41
SNF8-209ENST00000510558 SNAPC3Q92966 411 aa17.61■□□□□ 0.41
SNF8-209ENST00000510558 SPIN2AQ99865 258 aa17.61■□□□□ 0.41
SNF8-209ENST00000510558 SPIN2BQ9BPZ2 258 aa17.61■□□□□ 0.41
SNF8-209ENST00000510558 CCL28Q9NRJ3 127 aa17.61■□□□□ 0.41
SNF8-209ENST00000510558 MEIS3P1A6NDR6 274 aa17.6■□□□□ 0.41
SNF8-209ENST00000510558 XRCC3O43542 346 aa17.6■□□□□ 0.41
SNF8-209ENST00000510558 OR2A4O95047 310 aa17.6■□□□□ 0.41
SNF8-209ENST00000510558 PPYP01298 95 aa17.6■□□□□ 0.41
SNF8-209ENST00000510558 GP9P14770 177 aa17.6■□□□□ 0.41
SNF8-209ENST00000510558 UBE2NLQ5JXB2 153 aa17.6■□□□□ 0.41
SNF8-209ENST00000510558 VSTM2AQ8TAG5 236 aa17.6■□□□□ 0.41
SNF8-209ENST00000510558 S100A16Q96FQ6 103 aaKnown RBP17.6■□□□□ 0.41
SNF8-209ENST00000510558 OR2A7Q96R45 310 aa17.6■□□□□ 0.41
SNF8-209ENST00000510558 PEF1Q9UBV8 284 aaKnown RBP17.6■□□□□ 0.41
SNF8-209ENST00000510558 TNFSF12O43508 249 aa17.59■□□□□ 0.41
SNF8-209ENST00000510558 KBTBD11O94819 623 aa17.59■□□□□ 0.41
SNF8-209ENST00000510558 TRBV12-3P01733 135 aa17.59■□□□□ 0.41
SNF8-209ENST00000510558 KLF5Q13887 457 aaPredicted RBP17.59■□□□□ 0.41
SNF8-209ENST00000510558 HAPLN4Q86UW8 402 aa17.59■□□□□ 0.41
SNF8-209ENST00000510558 PUSL1Q8N0Z8 303 aaKnown RBP17.59■□□□□ 0.41
SNF8-209ENST00000510558 OR5AP2Q8NGF4 316 aa17.59■□□□□ 0.41
SNF8-209ENST00000510558 TMEM167AQ8TBQ9 72 aa17.59■□□□□ 0.41
SNF8-209ENST00000510558 ASCL2Q99929 193 aa17.59■□□□□ 0.41
SNF8-209ENST00000510558 RSRP1Q9BUV0 290 aa17.59■□□□□ 0.41
SNF8-209ENST00000510558 SLC5A7Q9GZV3 580 aa17.59■□□□□ 0.41
SNF8-209ENST00000510558 PRH1P02810 166 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 KIR2DS2P43631 304 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 FXYD4P59646 89 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 RHOGP84095 191 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 ZNF45Q02386 682 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 TTC9CQ8N5M4 171 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 SAMD12Q8N8I0 201 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 ZBTB34Q8NCN2 500 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 WWC2-AS2Q96NR7 200 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 AKIP1Q9NQ31 210 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 IFT46Q9NQC8 304 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 U3KQK5 164 aa17.58■□□□□ 0.4
SNF8-209ENST00000510558 FAM223BA6NKX1 122 aa17.57■□□□□ 0.4
SNF8-209ENST00000510558 HRASP01112 189 aa17.57■□□□□ 0.4
SNF8-209ENST00000510558 SYNJ2BPP57105 145 aa17.57■□□□□ 0.4
SNF8-209ENST00000510558 FAM223AQ8IWN6 122 aa17.57■□□□□ 0.4
SNF8-209ENST00000510558 OR9G4Q8NGQ1 327 aa17.57■□□□□ 0.4
SNF8-209ENST00000510558 GIMAP1Q8WWP7 306 aa17.57■□□□□ 0.4
SNF8-209ENST00000510558 TRBV9A0A0B4J1U6 114 aa17.56■□□□□ 0.4
SNF8-209ENST00000510558 HMX3A6NHT5 357 aa17.56■□□□□ 0.4
SNF8-209ENST00000510558 TEX22C9J3V5 150 aa17.56■□□□□ 0.4
SNF8-209ENST00000510558 IGLV1-51P01701 117 aa17.56■□□□□ 0.4
SNF8-209ENST00000510558 RPL27AP46776 148 aaKnown RBP17.56■□□□□ 0.4
SNF8-209ENST00000510558 TAS2R20P59543 309 aa17.56■□□□□ 0.4
SNF8-209ENST00000510558 EXOSC2Q13868 293 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms