RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 CASTOR1Q8WTX7 329 aa11.85□□□□□ -0.51
HTT-207ENST00000509751 SMIM4Q8WVI0 70 aa11.85□□□□□ -0.51
HTT-207ENST00000509751 OR4F4Q96R69 305 aa11.85□□□□□ -0.51
HTT-207ENST00000509751 A0A1W2PN81 502 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 FABP12A6NFH5 140 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 IGHG4P01861 327 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 EGR2P11161 476 aaPredicted RBP11.84□□□□□ -0.51
HTT-207ENST00000509751 CHRNA7P36544 502 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 TAS2R19P59542 299 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 SSBP2P81877 361 aaPredicted RBP11.84□□□□□ -0.51
HTT-207ENST00000509751 MRPS10P82664 201 aaKnown RBP11.84□□□□□ -0.51
HTT-207ENST00000509751 FOXE3Q13461 319 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 TNXAQ16473 311 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 VAX1Q5SQQ9 334 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 FAAP20Q6NZ36 180 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 UNQ5815/PRO19632Q6UWF5 114 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 KLHL30-AS1Q8NEE0 82 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 LFNGQ8NES3 379 aa11.84□□□□□ -0.51
HTT-207ENST00000509751 DPPA5A6NC42 116 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 GPR31O00270 319 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 RAB3DO95716 219 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 PF4P02776 101 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 ELANEP08246 267 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 APELAP0DMC3 54 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 PGAM2P15259 253 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 S100A5P33763 92 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 KIR2DS2P43631 304 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 PPP5CP53041 499 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 PRSS8Q16651 343 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 STEAP1BQ6NZ63 245 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 C8orf86Q6ZUL3 223 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 TEX45Q8NA69 505 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 TMEM229BQ8NBD8 167 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 BORCS5Q969J3 196 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 KLK15Q9H2R5 256 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 ZNF430Q9H8G1 570 aaPredicted RBP11.83□□□□□ -0.52
HTT-207ENST00000509751 ZNF580Q9UK33 172 aa11.83□□□□□ -0.52
HTT-207ENST00000509751 SOX15O60248 233 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
HTT-207ENST00000509751 RPA2P15927 270 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 PPIFP30405 207 aaKnown RBP11.82□□□□□ -0.52
HTT-207ENST00000509751 CRIP2P52943 208 aaPredicted RBP11.82□□□□□ -0.52
HTT-207ENST00000509751 MRGPRG-AS1Q2M3A8 158 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 SCGB2B2Q4G0G5 96 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 C10orf55Q5SWW7 151 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 FOXB2Q5VYV0 432 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 TMEM65Q6PI78 240 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 CMTM1Q8IZ96 169 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 POC5Q8NA72 575 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 MINDY2Q8NBR6 621 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 DUX3Q96PT4 197 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 OR5B12Q96R08 314 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 PHB2Q99623 299 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 RABL2AQ9UBK7 228 aaPredicted RBP11.82□□□□□ -0.52
HTT-207ENST00000509751 RABL2BQ9UNT1 228 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 FOXA2Q9Y261 457 aaPredicted RBP11.82□□□□□ -0.52
HTT-207ENST00000509751 NUBP2Q9Y5Y2 271 aa11.82□□□□□ -0.52
HTT-207ENST00000509751 CTDSPLO15194 276 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 S1PR2O95136 353 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 CD74P04233 296 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 PI3P19957 117 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 TBPP20226 339 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 PSMB8P28062 276 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 SSBP1Q04837 148 aaKnown RBP11.81□□□□□ -0.52
HTT-207ENST00000509751 TMEM267Q0VDI3 215 aaPredicted RBP11.81□□□□□ -0.52
HTT-207ENST00000509751 DEFB136Q30KP8 78 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 PYDC2Q56P42 97 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 C19orf54Q5BKX5 351 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 ZNF695Q8IW36 515 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 DGCR14Q96DF8 476 aaKnown RBP11.81□□□□□ -0.52
HTT-207ENST00000509751 RHOVQ96L33 236 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 MS4A10Q96PG2 267 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 SOSTQ9BQB4 213 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 RSRP1Q9BUV0 290 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 ZFP57Q9NU63 452 aa11.81□□□□□ -0.52
HTT-207ENST00000509751 RBFOX2O43251 390 aaKnown RBP eCLIP11.8□□□□□ -0.52
HTT-207ENST00000509751 GSTZ1O43708 216 aaPredicted RBP11.8□□□□□ -0.52
HTT-207ENST00000509751 ACTL6BO94805 426 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 KBTBD11O94819 623 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 OR2A4O95047 310 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 HRASP01112 189 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 IGLV1-40P01703 118 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 LPCAT3Q6P1A2 487 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 TBC1D26Q86UD7 250 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 C1QL4Q86Z23 238 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 MMD2Q8IY49 270 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 SLC38A6Q8IZM9 456 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 ARRDC1Q8N5I2 433 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 RNF152Q8N8N0 203 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 OR5T1Q8NG75 326 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 OR4C16Q8NGL9 310 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 SRSF12Q8WXF0 261 aaKnown RBP11.8□□□□□ -0.52
HTT-207ENST00000509751 OR2A7Q96R45 310 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 HRASLSQ9HDD0 168 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 ZNF355PQ9NSJ1 428 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 V9GYH0 126 aa11.8□□□□□ -0.52
HTT-207ENST00000509751 TNCP24821 2201 aa11.79□□□□□ -0.52
HTT-207ENST00000509751 NOTCH3Q9UM47 2321 aa11.79□□□□□ -0.52
HTT-207ENST00000509751 MSGN1A6NI15 193 aa11.79□□□□□ -0.52
HTT-207ENST00000509751 MPPED1O15442 326 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms