RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 SERPINB10P48595 397 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 ATP5G2Q06055 141 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 VKORC1L1Q8N0U8 176 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 TTC9CQ8N5M4 171 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 OR2K2Q8NGT1 345 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 OR10J5Q8NHC4 309 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 UFD1Q92890 307 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 CCDC140Q96MF4 163 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 PHB2Q99623 299 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 V9GY05 133 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 IGKV1D-13A0A0B4J2D9 117 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 CGB1A6NKQ9 187 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 NDUFB8O95169 186 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 HSMCR30P0CW71 290 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 IGKV1-13P0DP09 117 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 CALRP27797 417 aaKnown RBP11.92□□□□□ -0.5
RAB40C-202ENST00000509637 EIF4EBP1Q13541 118 aaPredicted RBP11.92□□□□□ -0.5
RAB40C-202ENST00000509637 SSX1Q16384 188 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 TATDN3Q17R31 274 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 OR10R2Q8NGX6 335 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 NRG4Q8WWG1 115 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 ACOT12Q8WYK0 555 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 RAB3CQ96E17 227 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 OVOL2Q9BRP0 275 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 RAB22AQ9UL26 194 aa11.92□□□□□ -0.5
RAB40C-202ENST00000509637 A0A075B6Q4 140 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 FAM223BA6NKX1 122 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 JTBO76095 146 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 TPPPO94811 219 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 HIST1H1DP16402 221 aaKnown RBP11.91□□□□□ -0.5
RAB40C-202ENST00000509637 RTL8BQ17RB0 113 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 VMA21Q3ZAQ7 101 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 FAM223AQ8IWN6 122 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 GPHA2Q96T91 129 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 PEMTQ9UBM1 199 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 MLXQ9UH92 298 aa11.91□□□□□ -0.5
RAB40C-202ENST00000509637 TMEM213A2RRL7 107 aa11.9□□□□□ -0.5
RAB40C-202ENST00000509637 AIREO43918 545 aa11.9□□□□□ -0.5
RAB40C-202ENST00000509637 RRASP10301 218 aa11.9□□□□□ -0.5
RAB40C-202ENST00000509637 CDK10Q15131 360 aa11.9□□□□□ -0.5
RAB40C-202ENST00000509637 GUCA2BQ16661 112 aa11.9□□□□□ -0.5
RAB40C-202ENST00000509637 C15orf32Q32M92 178 aa11.9□□□□□ -0.5
RAB40C-202ENST00000509637 OR2B11Q5JQS5 317 aa11.9□□□□□ -0.5
RAB40C-202ENST00000509637 TMEM61Q8N0U2 210 aa11.9□□□□□ -0.5
RAB40C-202ENST00000509637 ANKRD65E5RJM6 399 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 FCGR3BO75015 233 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 DIRAS3O95661 229 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 AREGP15514 252 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 CBLN1P23435 193 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 NFYAP23511 347 aaPredicted RBP11.89□□□□□ -0.51
RAB40C-202ENST00000509637 MLLT11Q13015 90 aaPredicted RBP11.89□□□□□ -0.51
RAB40C-202ENST00000509637 Q6ZS49 121 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 LAX1Q8IWV1 398 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 NECAP1Q8NC96 275 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 OSR1Q8TAX0 266 aaPredicted RBP11.89□□□□□ -0.51
RAB40C-202ENST00000509637 SLC2A8Q9NY64 477 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 FBXL7Q9UJT9 491 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 FRAS1Q86XX4 4008 aa11.89□□□□□ -0.51
RAB40C-202ENST00000509637 LGALS9O00182 355 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 MPPED1O15442 326 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 ARL6IP5O75915 188 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 AQP4P55087 323 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 KLK9Q2XQG4 91 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 CLEC19AQ6UXS0 136 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 UNQ9165/PRO28630Q6UXU0 137 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 PUSL1Q8N0Z8 303 aaKnown RBP11.88□□□□□ -0.51
RAB40C-202ENST00000509637 LINC00476Q8WZB0 136 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 KCTD12Q96CX2 325 aaKnown RBP11.88□□□□□ -0.51
RAB40C-202ENST00000509637 ADTRPQ96IZ2 230 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 MGLLQ99685 303 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 KLK9Q9UKQ9 250 aa11.88□□□□□ -0.51
RAB40C-202ENST00000509637 RBMX2Q9Y388 322 aaKnown RBP11.88□□□□□ -0.51
RAB40C-202ENST00000509637 KMT2AQ03164 3969 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 SMIM30A4D0T7 59 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 IFITM5A6NNB3 132 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 GGCTO75223 188 aaKnown RBP11.87□□□□□ -0.51
RAB40C-202ENST00000509637 HLA-DQB1P01920 261 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 ZNF735P0CB33 412 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 TM4SF20Q53R12 229 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 ZNF773Q6PK81 442 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 GPHB5Q86YW7 130 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 MMD2Q8IY49 270 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 DYNLRB2Q8TF09 96 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 GINS4Q9BRT9 223 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 OR51E2Q9H255 320 aa11.87□□□□□ -0.51
RAB40C-202ENST00000509637 RBM7Q9Y580 266 aaKnown RBP11.87□□□□□ -0.51
RAB40C-202ENST00000509637 MFSD2BA6NFX1 497 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 SSX5O60225 188 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 SCAF4O95104 1147 aaKnown RBP11.86□□□□□ -0.51
RAB40C-202ENST00000509637 CRYGCP07315 174 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 CRHBPP24387 322 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 UXS1Q8NBZ7 420 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 IL17DQ8TAD2 202 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 TMEM167AQ8TBQ9 72 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 SPIN2AQ99865 258 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 SPIN2BQ9BPZ2 258 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 SCN3BQ9NY72 215 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 ZNF257Q9Y2Q1 563 aa11.86□□□□□ -0.51
RAB40C-202ENST00000509637 TRAV1-2A0A0B4J238 106 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms