RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 OPRM1P35372 400 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 PPP1CCP36873 323 aaKnown RBP1.23□□□□□ -2.21
XRCC4-204ENST00000509268 NUDT2P50583 147 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 SGPP2Q8IWX5 399 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 AMN1Q8IY45 258 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 OSR2Q8N2R0 312 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 MIR7-3HGQ8N6C7 128 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 GDPD1Q8N9F7 314 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 FER1L6-AS1Q8NA97 138 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 ST6GALNAC3Q8NDV1 305 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 OR13C8Q8NGS7 320 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 GNPDA2Q8TDQ7 276 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 RAB2BQ8WUD1 216 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 DYDC1Q8WWB3 177 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 ELSPBP1Q96BH3 223 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 TRIB3Q96RU7 358 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 RNF5Q99942 180 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 ZNF2Q9BSG1 426 aaPredicted RBP1.23□□□□□ -2.21
XRCC4-204ENST00000509268 FAM96AQ9H5X1 160 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 PARVBQ9HBI1 364 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 TAAR3PQ9P1P4 343 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 GINS2Q9Y248 185 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 CYSLTR1Q9Y271 337 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 ERGIC3Q9Y282 383 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 PHLDA3Q9Y5J5 127 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 NUP214P35658 2090 aaPredicted RBP1.23□□□□□ -2.21
XRCC4-204ENST00000509268 HECW1Q76N89 1606 aa1.23□□□□□ -2.21
XRCC4-204ENST00000509268 CABIN1Q9Y6J0 2220 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 DENND4BO75064 1496 aaPredicted RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 MIA2Q96PC5 1412 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 DSCAML1Q8TD84 2053 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 NUP155O75694 1391 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 A0A0J9YY10 115 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 A0A1B0GX78 115 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 A0A1W2PRE2 83 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 IGSF23A1L1A6 192 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 PINLYPA6NC86 204 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 MAP1LC3B2A6NCE7 125 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 LINC00862A6NCI5 91 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 SIGLEC16A6NMB1 481 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 A8MUU9 505 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 IGLL5B9A064 214 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 TSTD3H0UI37 97 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 HMGB3O15347 200 aaKnown RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 PIAS1O75925 651 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 CRYZL1O95825 349 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 NRASP01111 189 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 HRASP01112 189 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 KRASP01116 189 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 PDYNP01213 254 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 LHBP01229 141 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 IGKV1D-33P01593 117 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 IGKV1-33P01594 117 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 CD7P09564 240 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 LINC00869P0C866 280 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 SCGB1A1P11684 91 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 IL1RNP18510 177 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 ERP29P30040 261 aaKnown RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 ZNF140P52738 457 aaPredicted RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 WNT4P56705 351 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 ENDOGQ14249 297 aaKnown RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 SURF2Q15527 256 aaPredicted RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 CST6Q15828 149 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 AKR1C8PQ5T2L2 129 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 IBA57Q5T440 356 aaKnown RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 PRSS54Q6PEW0 395 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 DCUN1D2Q6PH85 259 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 SLC22A24Q8N4F4 322 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 EIF4E3Q8N5X7 224 aaKnown RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 ZFAND2AQ8N6M9 145 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 SPANXA2-OT1Q8N9U9 137 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 GRPEL2Q8TAA5 225 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 RTN4IP1Q8WWV3 396 aaPredicted RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 MAFIPQ8WZ33 124 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 RBPMSQ93062 196 aaKnown RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 L3HYPDHQ96EM0 354 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 RMND5BQ96G75 393 aaPredicted RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 IGF2BP2-AS1Q96M15 143 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 NMNAT3Q96T66 252 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 NDFIP1Q9BT67 221 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 C1QTNF6Q9BXI9 259 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 MAP1LC3BQ9GZQ8 125 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 FAM107BQ9H098 131 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 GABARAPL1Q9H0R8 117 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 SH3BGRL3Q9H299 93 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 C11orf68Q9H3H3 251 aaKnown RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 LRTM1Q9HBL6 345 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 GPR84Q9NQS5 396 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 PRTFDC1Q9NRG1 225 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 KCNIP2Q9NS61 270 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 FBXL12Q9NXK8 326 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 ENOPH1Q9UHY7 261 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 RPUSD1Q9UJJ7 312 aaKnown RBP1.22□□□□□ -2.21
XRCC4-204ENST00000509268 LINC00588Q9Y4M8 146 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 NUP205Q92621 2012 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 MYH3P11055 1940 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 SETD5Q9C0A6 1442 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 ARHGEF10O15013 1369 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 KIAA1671Q9BY89 1806 aa1.22□□□□□ -2.21
XRCC4-204ENST00000509268 TRBV20OR9-2A0A075B6H5 130 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms