RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 AGMATQ9BSE5 352 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 RAB18Q9NP72 206 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 SLC2A8Q9NY64 477 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 EHFQ9NZC4 300 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 ZNRD1Q9P1U0 126 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 SCP2D1Q9UJQ7 156 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 PITPNC1Q9UKF7 332 aa4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 RBM7Q9Y580 266 aaKnown RBP4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 ANK3Q12955 4377 aaKnown RBP4.41□□□□□ -1.7
HMGB1P44-201ENST00000508597 A0A0U1RQK1 487 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 FAM172BPA6NC97 362 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 MEIS3P1A6NDR6 274 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 HSD17B6O14756 317 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 TCF21O43680 179 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 RAB3DO95716 219 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 PPYP01298 95 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 PMP2P02689 132 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 CD3DP04234 171 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 FAM106CPP0CH98 169 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 RRASP10301 218 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 HLA-DMAP28067 261 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 CD1BP29016 333 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 GPR12P47775 334 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 RFX2P48378 723 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 HILS1P60008 231 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 GNMTQ14749 295 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 LRRC75BQ2VPJ9 315 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 DEFB112Q30KQ8 113 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 TRIQKQ629K1 86 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 RUSC1-AS1Q66K80 236 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZNF833PQ6ZTB9 187 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 Q71RC1 249 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 TGIF2LXQ8IUE1 241 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 PDZD9Q8IXQ8 264 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 CMTM1Q8IZ96 169 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC38A6Q8IZM9 456 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 LYG1Q8N1E2 194 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 TCTEX1D1Q8N7M0 179 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 TERB2Q8NHR7 220 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 UBALD1Q8TB05 177 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZFAND2BQ8WV99 257 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 MOB3AQ96BX8 217 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 CYYR1Q96J86 154 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 HSD17B10Q99714 261 aaKnown RBP4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 RNF5Q99942 180 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZNF2Q9BSG1 426 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 IFI27L2Q9H2X8 130 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 ABCB10Q9NRK6 738 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 FAM212BQ9NTI7 297 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR1A1Q9P1Q5 309 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 NF1P21359 2839 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 ATRQ13535 2644 aa4.4□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGHV3OR16-10A0A075B7F0 116 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 SAA2-SAA4A0A096LPE2 208 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 PIGBOS1A0A0B4J2F0 54 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 IGHV1-3A0A0C4DH29 117 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 A0A1W2PPI3 338 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 A0A1W2PRD5 423 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 A0A1W2PRF3 423 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 A0A1W2PRM7 423 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR5H14A6NHG9 310 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 RNF212BA8MTL3 300 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 TEX22C9J3V5 150 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 TRIM77I1YAP6 450 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 M0QZK8 103 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 GPR31O00270 319 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 TSPAN4O14817 238 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 B3GALNT1O75752 331 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR8U9P0C7N5 309 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 SAA2P0DJI9 122 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 IL7P13232 177 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 AADACP22760 399 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 NFYAP23511 347 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 KIR2DS2P43631 304 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 IER3P46695 156 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 THBS3P49746 956 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 RAB13P51153 203 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 DLX1P56177 255 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 BAMBIQ13145 260 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 CATR1Q13166 79 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 CBX3Q13185 183 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 KLF9Q13886 244 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 EBI3Q14213 229 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 SSX2Q16385 188 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZNF57Q68EA5 555 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 DHRS7BQ6IAN0 325 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 C11orf88Q6PI97 169 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 IL17RELQ6ZVW7 336 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 LHFPL4Q7Z7J7 247 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 LHFPL1Q86WI0 220 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 ODF3L1Q8IXM7 274 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR8H1Q8NGG4 311 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR4C16Q8NGL9 310 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 OR8U1Q8NH10 309 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 ZFAND1Q8TCF1 268 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 CD300LFQ8TDQ1 290 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 RTN4IP1Q8WWV3 396 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 LEAP2Q969E1 77 aa4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 SDHCQ99643 169 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P44-201ENST00000508597 SLC6A7Q99884 636 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms