RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SMIM3Q9BZL3 60 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 EIF5A2Q9GZV4 153 aaKnown RBP2.92□□□□□ -1.94
GYPA-205ENST00000508337 FAM49BQ9NUQ9 324 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 SPANXCQ9NY87 97 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 CALML5Q9NZT1 146 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 SLC23A2Q9UGH3 650 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 ZNF230Q9UIE0 474 aaPredicted RBP2.92□□□□□ -1.94
GYPA-205ENST00000508337 LINC00527Q9UJ94 153 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 TRAPPC2LQ9UL33 140 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 PCYT1BQ9Y5K3 369 aaPredicted RBP2.92□□□□□ -1.94
GYPA-205ENST00000508337 ZNF706Q9Y5V0 76 aaPredicted RBP2.92□□□□□ -1.94
GYPA-205ENST00000508337 PTPRGP23470 1445 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 PTPRKQ15262 1439 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 MIA2Q96PC5 1412 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 YTHDC2Q9H6S0 1430 aaKnown RBP2.92□□□□□ -1.94
GYPA-205ENST00000508337 CNTLNQ9NXG0 1405 aa2.92□□□□□ -1.94
GYPA-205ENST00000508337 BORCS7-ASMTA0A0B4J1R7 106 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 IGHV2-26A0A0B4J1V2 119 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 TRAV40A0A0B4J280 105 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 SIGLEC16A6NMB1 481 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 C4orf51C9J302 202 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 AIPO00170 330 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 ISLRO14498 428 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 BANF1O75531 89 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 CSN2P05814 226 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 DBIP07108 87 aaKnown RBP2.91□□□□□ -1.94
GYPA-205ENST00000508337 SCGB1C2P0DMR2 95 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 OR12D1P0DN82 309 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 BLVRBP30043 206 aaPredicted RBP2.91□□□□□ -1.94
GYPA-205ENST00000508337 RPL35P42766 123 aaKnown RBP2.91□□□□□ -1.94
GYPA-205ENST00000508337 PSMB3P49720 205 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 KLF3P57682 345 aaPredicted RBP2.91□□□□□ -1.94
GYPA-205ENST00000508337 GNG2P59768 71 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 GABARAPL2P60520 117 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 RPS28P62857 69 aaKnown RBP2.91□□□□□ -1.94
GYPA-205ENST00000508337 HIST1H1AQ02539 215 aaPredicted RBP2.91□□□□□ -1.94
GYPA-205ENST00000508337 TMEM241Q24JQ0 296 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 C12orf74Q32Q52 190 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 TCEAL5Q5H9L2 206 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 IBA57Q5T440 356 aaKnown RBP2.91□□□□□ -1.94
GYPA-205ENST00000508337 TMEM86AQ8N2M4 240 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 DRAM1Q8N682 238 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 OR4K15Q8NH41 348 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 OR1L1Q8NH94 360 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 SLC25A40Q8TBP6 338 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 SCGB1C1Q8TD33 95 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 DEDD2Q8WXF8 326 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 ACOT12Q8WYK0 555 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 C14orf144Q96I85 54 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 ZNF382Q96SR6 550 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 NMNAT3Q96T66 252 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 SERPINI1Q99574 410 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 DOHHQ9BU89 302 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 POPDC3Q9HBV1 291 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 UBQLN4Q9NRR5 601 aa2.91□□□□□ -1.94
GYPA-205ENST00000508337 NPHP4O75161 1426 aaPredicted RBP2.91□□□□□ -1.94
GYPA-205ENST00000508337 GRIN2BQ13224 1484 aa2.9□□□□□ -1.94
GYPA-205ENST00000508337 TRAV36DV7A0A075B6V5 113 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 TRAV19A0A0A6YYK7 116 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 RIIAD1A6NNX1 92 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 B4DEV8 164 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 K7ERU9 68 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 M0R2Z0 102 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 LGALS9O00182 355 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 COX7A2P2O60397 106 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 HLA-DQB2P05538 268 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 C8GP07360 202 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 SOD3P08294 240 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 ADRA2AP08913 450 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 MUC1P15941 1255 aaPredicted RBP2.9□□□□□ -1.95
GYPA-205ENST00000508337 RPS3P23396 243 aaKnown RBP eCLIP2.9□□□□□ -1.953e-8■■■□□ 17.8
GYPA-205ENST00000508337 POLR2IP36954 125 aaKnown RBP2.9□□□□□ -1.95
GYPA-205ENST00000508337 RBP2P50120 134 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 HTR4Q13639 388 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 SSX1Q16384 188 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 RNASE10Q5GAN6 216 aaKnown RBP2.9□□□□□ -1.95
GYPA-205ENST00000508337 HES3Q5TGS1 186 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 ZNF880Q6PDB4 577 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 SHISA6Q6ZSJ9 500 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 MDP1Q86V88 176 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 LRRC28Q86X40 367 aaPredicted RBP2.9□□□□□ -1.95
GYPA-205ENST00000508337 SGPP2Q8IWX5 399 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 YIPF7Q8N8F6 280 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 OR1J4Q8NGS1 313 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 MALSU1Q96EH3 234 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 THTPAQ9BU02 230 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 OR2D2Q9H210 308 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 ANAPC10Q9UM13 185 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 TMEM14AQ9Y6G1 99 aa2.9□□□□□ -1.95
GYPA-205ENST00000508337 LOC102724200A0A096LPH7 203 aaPredicted RBP2.89□□□□□ -1.95
GYPA-205ENST00000508337 A0A1B0GVG6 124 aa2.89□□□□□ -1.95
GYPA-205ENST00000508337 FAM92AA1XBS5 289 aa2.89□□□□□ -1.95
GYPA-205ENST00000508337 C9orf170A2RU37 121 aa2.89□□□□□ -1.95
GYPA-205ENST00000508337 OR4C45A6NMZ5 311 aa2.89□□□□□ -1.95
GYPA-205ENST00000508337 CD300LBA8K4G0 201 aa2.89□□□□□ -1.95
GYPA-205ENST00000508337 F5H5P2 479 aa2.89□□□□□ -1.95
GYPA-205ENST00000508337 PIRO00625 290 aa2.89□□□□□ -1.95
GYPA-205ENST00000508337 RGS5O15539 181 aa2.89□□□□□ -1.95
GYPA-205ENST00000508337 PLCH2O75038 1416 aa2.89□□□□□ -1.95
GYPA-205ENST00000508337 OR4Q2P0C623 313 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 255.6 ms