RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 LPCAT3Q6P1A2 487 aa15.14■□□□□ 0.01
LMNA-221ENST00000506981 ZNF695Q8IW36 515 aa15.14■□□□□ 0.01
LMNA-221ENST00000506981 CMTM1Q8IZ96 169 aa15.14■□□□□ 0.01
LMNA-221ENST00000506981 RNF152Q8N8N0 203 aa15.14■□□□□ 0.01
LMNA-221ENST00000506981 VSTM2AQ8TAG5 236 aa15.14■□□□□ 0.01
LMNA-221ENST00000506981 GPHA2Q96T91 129 aa15.14■□□□□ 0.01
LMNA-221ENST00000506981 FAM103A1Q9BTL3 118 aaKnown RBP15.14■□□□□ 0.01
LMNA-221ENST00000506981 FXYD6Q9H0Q3 95 aa15.14■□□□□ 0.01
LMNA-221ENST00000506981 KLK11Q9UBX7 282 aa15.14■□□□□ 0.01
LMNA-221ENST00000506981 FOXA2Q9Y261 457 aaPredicted RBP15.14■□□□□ 0.01
LMNA-221ENST00000506981 ZNF701M0R085 212 aaPredicted RBP15.13■□□□□ 0.01
LMNA-221ENST00000506981 ACTL6BO94805 426 aa15.13■□□□□ 0.01
LMNA-221ENST00000506981 HRASP01112 189 aa15.13■□□□□ 0.01
LMNA-221ENST00000506981 PSMB8P28062 276 aa15.13■□□□□ 0.01
LMNA-221ENST00000506981 CD40LGP29965 261 aa15.13■□□□□ 0.01
LMNA-221ENST00000506981 PPIFP30405 207 aaKnown RBP15.13■□□□□ 0.01
LMNA-221ENST00000506981 SSBP1Q04837 148 aaKnown RBP15.13■□□□□ 0.01
LMNA-221ENST00000506981 LCNL1Q6ZST4 164 aa15.13■□□□□ 0.01
LMNA-221ENST00000506981 SPAG16Q8N0X2 631 aa15.13■□□□□ 0.01
LMNA-221ENST00000506981 LFNGQ8NES3 379 aa15.13■□□□□ 0.01
LMNA-221ENST00000506981 OR51H1Q8NH63 302 aa15.13■□□□□ 0.01
LMNA-221ENST00000506981 AIFM2Q9BRQ8 373 aa15.13■□□□□ 0.01
LMNA-221ENST00000506981 RBM38Q9H0Z9 239 aaKnown RBP15.13■□□□□ 0.01
LMNA-221ENST00000506981 M0QYG6 137 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 GPR31O00270 319 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 CD33P20138 364 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 GNRHRP30968 328 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 TAS2R19P59542 299 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 DGCR2P98153 550 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 PJVKQ0ZLH3 352 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 TNXAQ16473 311 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 AKIRIN2Q53H80 203 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 IDO2Q6ZQW0 420 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 C8orf86Q6ZUL3 223 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 MMD2Q8IY49 270 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 MINDY2Q8NBR6 621 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 OR5M8Q8NGP6 311 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 CD300LFQ8TDQ1 290 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 PHB2Q99623 299 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 NUBP2Q9Y5Y2 271 aa15.12■□□□□ 0.01
LMNA-221ENST00000506981 ARPC1BO15143 372 aaKnown RBP15.11■□□□□ 0.01
LMNA-221ENST00000506981 RBFOX2O43251 390 aaKnown RBP eCLIP15.11■□□□□ 0.015e-8■■■□□ 15.8
LMNA-221ENST00000506981 IGLV1-40P01703 118 aa15.11■□□□□ 0.01
LMNA-221ENST00000506981 CD3DP04234 171 aa15.11■□□□□ 0.01
LMNA-221ENST00000506981 RLN1P04808 185 aa15.11■□□□□ 0.01
LMNA-221ENST00000506981 S100A5P33763 92 aa15.11■□□□□ 0.01
LMNA-221ENST00000506981 CDX1P47902 265 aaPredicted RBP15.11■□□□□ 0.01
LMNA-221ENST00000506981 PRSS8Q16651 343 aa15.11■□□□□ 0.01
LMNA-221ENST00000506981 ARRDC1Q8N5I2 433 aa15.11■□□□□ 0.01
LMNA-221ENST00000506981 TMEM229BQ8NBD8 167 aa15.11■□□□□ 0.01
LMNA-221ENST00000506981 SMIM4Q8WVI0 70 aa15.11■□□□□ 0.01
LMNA-221ENST00000506981 NXF2Q9GZY0 626 aaKnown RBP15.11■□□□□ 0.01
LMNA-221ENST00000506981 CTDSPLO15194 276 aa15.1■□□□□ 0.01
LMNA-221ENST00000506981 OR2A4O95047 310 aa15.1■□□□□ 0.01
LMNA-221ENST00000506981 EGR2P11161 476 aaPredicted RBP15.1■□□□□ 0.01
LMNA-221ENST00000506981 C19orf54Q5BKX5 351 aa15.1■□□□□ 0.01
LMNA-221ENST00000506981 C18orf65Q6ZTR6 163 aa15.1■□□□□ 0.01
LMNA-221ENST00000506981 SLC38A6Q8IZM9 456 aa15.1■□□□□ 0.01
LMNA-221ENST00000506981 RHOVQ96L33 236 aa15.1■□□□□ 0.01
LMNA-221ENST00000506981 TMEM68Q96MH6 324 aa15.1■□□□□ 0.01
LMNA-221ENST00000506981 OR2A7Q96R45 310 aa15.1■□□□□ 0.01
LMNA-221ENST00000506981 TINAGL1Q9GZM7 467 aaPredicted RBP15.1■□□□□ 0.01
LMNA-221ENST00000506981 FABP12A6NFH5 140 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 MPPED1O15442 326 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 RAMP3O60896 148 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 PGLYRP1O75594 196 aaPredicted RBP15.09■□□□□ 0.01
LMNA-221ENST00000506981 KBTBD11O94819 623 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 RAB3DO95716 219 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 HPRT1P00492 218 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 PGAM2P15259 253 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 TNFSF8P32971 234 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 MYCNOSP40205 109 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 RAB9AP51151 201 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 PHLDA2Q53GA4 152 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 STEAP1BQ6NZ63 245 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 SSX9Q7RTT3 188 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 VKORC1L1Q8N0U8 176 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 C4orf3Q8WVX3 66 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 UBE2E2Q96LR5 201 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 KLK15Q9H2R5 256 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 ZNF430Q9H8G1 570 aaPredicted RBP15.09■□□□□ 0.01
LMNA-221ENST00000506981 ZNF355PQ9NSJ1 428 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 VSIG4Q9Y279 399 aa15.09■□□□□ 0.01
LMNA-221ENST00000506981 NQO2P16083 231 aa15.08■□□□□ 0
LMNA-221ENST00000506981 UCP3P55916 312 aa15.08■□□□□ 0
LMNA-221ENST00000506981 BRWD1-AS2P59051 145 aa15.08■□□□□ 0
LMNA-221ENST00000506981 TAS2R31P59538 309 aa15.08■□□□□ 0
LMNA-221ENST00000506981 ERVK-16P61578 105 aa15.08■□□□□ 0
LMNA-221ENST00000506981 MEF2DQ14814 521 aa15.08■□□□□ 0
LMNA-221ENST00000506981 SRSF12Q8WXF0 261 aaKnown RBP15.08■□□□□ 0
LMNA-221ENST00000506981 SLA2Q9H6Q3 261 aa15.08■□□□□ 0
LMNA-221ENST00000506981 PLEKHA2Q9HB19 425 aa15.08■□□□□ 0
LMNA-221ENST00000506981 SOX15O60248 233 aa15.07■□□□□ 0
LMNA-221ENST00000506981 CD74P04233 296 aa15.07■□□□□ 0
LMNA-221ENST00000506981 F2RP25116 425 aa15.07■□□□□ 0
LMNA-221ENST00000506981 TPPP2P59282 170 aa15.07■□□□□ 0
LMNA-221ENST00000506981 SSBP2P81877 361 aaPredicted RBP15.07■□□□□ 0
LMNA-221ENST00000506981 SCGB2B2Q4G0G5 96 aa15.07■□□□□ 0
LMNA-221ENST00000506981 PUSL1Q8N0Z8 303 aaKnown RBP15.07■□□□□ 0
LMNA-221ENST00000506981 ZNF491Q8N8L2 437 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms