RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 KLRD1Q13241 179 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 THOC7Q6I9Y2 204 aaKnown RBP11.23□□□□□ -0.61
SERF1B-204ENST00000506542 PRSS54Q6PEW0 395 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 ZNF833PQ6ZTB9 187 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 FAM219AQ8IW50 185 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 ABHD12Q8N2K0 398 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 PNKDQ8N490 385 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 Q8N7P7 452 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
SERF1B-204ENST00000506542 TNFRSF14Q92956 283 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 LHX4Q969G2 390 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 RNF126Q9BV68 326 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 TNFSF18Q9UNG2 199 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 PRELID3BQ9Y3B1 194 aa11.23□□□□□ -0.61
SERF1B-204ENST00000506542 IGHV2-26A0A0B4J1V2 119 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 A0A1B0GU03 582 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 FCGR3BO75015 233 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 ATG12O94817 140 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 S1PR2O95136 353 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 MBPP02686 304 aaPredicted RBP11.22□□□□□ -0.61
SERF1B-204ENST00000506542 ATF4P18848 351 aaPredicted RBP11.22□□□□□ -0.61
SERF1B-204ENST00000506542 ZNF137PP52743 207 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 FAM71F2Q6NXP2 309 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 VMO1Q7Z5L0 202 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 OR10X1Q8NGY0 326 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 GPR146Q96CH1 333 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
SERF1B-204ENST00000506542 CLEC7AQ9BXN2 247 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 ZFP57Q9NU63 452 aa11.22□□□□□ -0.61
SERF1B-204ENST00000506542 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 K7EPK0 472 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 L7N2F9 121 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 PITX3O75364 302 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 SCGB1D2O95969 90 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 HPRT1P00492 218 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 P0C879 139 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 FAM71E2Q8N5Q1 922 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 KIR3DL3Q8N743 410 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 ZNF383Q8NA42 475 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 OR1S1Q8NH92 325 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 ST6GALNAC6Q969X2 333 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 MFFQ9GZY8 342 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 PLEKHA2Q9HB19 425 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 OR5AC2Q9NZP5 309 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 MMP24Q9Y5R2 645 aa11.21□□□□□ -0.61
SERF1B-204ENST00000506542 ANK2Q01484 3957 aa11.21□□□□□ -0.62
SERF1B-204ENST00000506542 TOR1AO14656 332 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 DEDDO75618 318 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 IGLV1-47P01700 117 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 G6PCP35575 357 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 PRRX1P54821 245 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 ZNF345Q14585 488 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 SMCO1Q147U7 214 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 Q6ZRM9 215 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 C1orf122Q6ZSJ8 110 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 FOXRED2Q8IWF2 684 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.2□□□□□ -0.62
SERF1B-204ENST00000506542 BEND2Q8NDZ0 799 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 OR4S2Q8NH73 311 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 DCUN1D4Q92564 292 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 C19orf24Q9BVV8 132 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 MS4A7Q9GZW8 240 aaPredicted RBP11.2□□□□□ -0.62
SERF1B-204ENST00000506542 TNFRSF19Q9NS68 423 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 LSM5Q9Y4Y9 91 aaKnown RBP11.2□□□□□ -0.62
SERF1B-204ENST00000506542 POMT1Q9Y6A1 747 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 RNF222A6NCQ9 220 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 ST8SIA3O43173 380 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 OR2F2O95006 317 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 KRASP01116 189 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 RLN2P04090 185 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 CT45A6P0DMU7 189 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 CT45A5P0DMU8 189 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 CT45A7P0DMV0 189 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 PAX6P26367 422 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 IL3RAP26951 378 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 NKX2-1P43699 371 aaPredicted RBP11.2□□□□□ -0.62
SERF1B-204ENST00000506542 IFITM2Q01629 132 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 OR2F1Q13607 317 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 IZUMO4Q1ZYL8 232 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 HLA-DRB5Q30154 266 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 DEFB112Q30KQ8 113 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 ACOT7LQ6ZUV0 252 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 COA4Q9NYJ1 87 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
SERF1B-204ENST00000506542 A0A0D9SG52 128 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 MARCH11A6NNE9 402 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 RNASEK-C17orf49H0YIS7 233 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 C4BPBP20851 252 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 PRTN3P24158 256 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 S100A11P31949 105 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 HILS1P60008 231 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 ID3Q02535 119 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 TMUB2Q71RG4 321 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 INO80EQ8NBZ0 244 aaPredicted RBP11.19□□□□□ -0.62
SERF1B-204ENST00000506542 ZNF418Q8TF45 676 aaPredicted RBP11.19□□□□□ -0.62
SERF1B-204ENST00000506542 R3HDM4Q96D70 268 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 ARPC5LQ9BPX5 153 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 GON7Q9BXV9 100 aa11.19□□□□□ -0.62
SERF1B-204ENST00000506542 MRPL20Q9BYC9 149 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms