RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 ARF6P62330 175 aa3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 FKBP1AP62942 108 aaKnown RBP3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 TNFAIP6P98066 277 aaPredicted RBP3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 FAM229BQ4G0N7 80 aa3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 TMEM97Q5BJF2 176 aa3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 WDR59Q6PJI9 974 aa3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 ZNF664Q8N3J9 261 aa3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 OR10D4PQ8NGN7 298 aa3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 BTF3L4Q96K17 158 aa3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 PPP1R2P1Q96PQ5 205 aa3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 TXNL4BQ9NX01 149 aaKnown RBP3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 DOK5Q9P104 306 aa3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 KLK5Q9Y337 293 aaPredicted RBP3.35□□□□□ -1.87
AP001960.1-201ENST00000506494 KNCNA6PVL3 124 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 C17orf98A8MV24 154 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 SERPINA1P01009 418 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 GZMMP51124 257 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 GLT8D1Q68CQ7 371 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 SPATA12Q7Z6I5 190 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 TBC1D19Q8N5T2 526 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 CNEP1R1Q8N9A8 125 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 SGMS2Q8NHU3 365 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 BORCS7Q96B45 105 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 TVP23CQ96ET8 276 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 PKMYT1Q99640 499 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 CMSS1Q9BQ75 279 aaKnown RBP3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 MIEN1Q9BRT3 115 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 DCSTAMPQ9H295 470 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 PRELID1Q9Y255 219 aa3.34□□□□□ -1.87
AP001960.1-201ENST00000506494 COL1A2P08123 1366 aa3.34□□□□□ -1.88
AP001960.1-201ENST00000506494 PRR14LQ5THK1 2151 aa3.34□□□□□ -1.88
AP001960.1-201ENST00000506494 DSCAML1Q8TD84 2053 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 A0A087WUJ7 227 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 A0A087WUU8 490 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 VPS37CA5D8V6 355 aaPredicted RBP3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 LST1O00453 97 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 CD5P06127 495 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 HIST1H1TP22492 207 aaPredicted RBP3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 TAS2R20P59543 309 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 CDK10Q15131 360 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 GRK1Q15835 563 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 TNFAIP8L3Q5GJ75 292 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 TMPPEQ6ZT21 453 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 RNASE6Q93091 150 aaKnown RBP3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 CEP19Q96LK0 163 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 CMTM6Q9NX76 183 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 PRELID3BQ9Y3B1 194 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 HSPE1-MOB4S4R3N1 261 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 ADGRL3Q9HAR2 1447 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 GRIN2BQ13224 1484 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 COL18A1P39060 1754 aa3.33□□□□□ -1.88
AP001960.1-201ENST00000506494 A0A1W2PNN7 141 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 OR5K4A6NMS3 321 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 TXNDC9O14530 226 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 NOS1APO75052 506 aaPredicted RBP3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 HAND1O96004 215 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 TTRP02766 147 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 ZNF705DP0CH99 300 aaPredicted RBP3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 COL8A2P25067 703 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 RAB13P51153 203 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 POLR2GP62487 172 aaKnown RBP eCLIP3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 RPL30P62888 115 aaKnown RBP3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 HIST1H3AP68431 136 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 H3F3AP84243 136 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 LGALS9BQ3B8N2 356 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 LGALS9CQ6DKI2 356 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 SMARCD3Q6STE5 483 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 OR6V1Q8N148 313 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 OR5C1Q8NGR4 320 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 PHB2Q99623 299 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 C16orf95Q9H693 158 aa3.32□□□□□ -1.88
AP001960.1-201ENST00000506494 NAV1Q8NEY1 1877 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 ADAMTSL1Q8N6G6 1762 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 A8MUN3 132 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 G3V3Q6 166 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 H3BPC8 53 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 PLA2G10O15496 165 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 SULT1B1O43704 296 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 GZMBP10144 247 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 RBM11P57052 281 aaKnown RBP3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 FXYD7P58549 80 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 PSG4Q00888 419 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 GLO1Q04760 184 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 ANKRD29Q8N6D5 301 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 KLK6Q92876 244 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 SIGMAR1Q99720 223 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 KIFC1Q9BW19 673 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 COMMD5Q9GZQ3 224 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 AICDAQ9GZX7 198 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 NMNAT1Q9HAN9 279 aaPredicted RBP3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 PRTFDC1Q9NRG1 225 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 MRPL27Q9P0M9 148 aaKnown RBP3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 STOML2Q9UJZ1 356 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 OTOFQ9HC10 1997 aa3.31□□□□□ -1.88
AP001960.1-201ENST00000506494 LTBP4Q8N2S1 1624 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 TMEM269A0A1B0GVZ9 245 aa3.3□□□□□ -1.88
AP001960.1-201ENST00000506494 A0A1W2PNM2 257 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms