RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 CRYGBP07316 175 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 PPIFP30405 207 aaKnown RBP13.07□□□□□ -0.32
SNCA-209ENST00000506244 GNB1P62873 340 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 AKIRIN2Q53H80 203 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 ZNF695Q8IW36 515 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 MINDY2Q8NBR6 621 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 OR5M8Q8NGP6 311 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 GRPEL2Q8TAA5 225 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 ABHD1Q96SE0 405 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 FXYD6Q9H0Q3 95 aa13.07□□□□□ -0.32
SNCA-209ENST00000506244 RBM38Q9H0Z9 239 aaKnown RBP13.07□□□□□ -0.32
SNCA-209ENST00000506244 CMYA5Q8N3K9 4069 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 A0A1W2PN81 502 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 SRRM4A7MD48 611 aaKnown RBP13.06□□□□□ -0.32
SNCA-209ENST00000506244 IGLV1-40P01703 118 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 SAA1P0DJI8 122 aaPredicted RBP13.06□□□□□ -0.32
SNCA-209ENST00000506244 CHRNA7P36544 502 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 CDX1P47902 265 aaPredicted RBP13.06□□□□□ -0.32
SNCA-209ENST00000506244 TAS2R19P59542 299 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 PRSS8Q16651 343 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 C19orf54Q5BKX5 351 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 UNQ5815/PRO19632Q6UWF5 114 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 SPAG16Q8N0X2 631 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 ARRDC1Q8N5I2 433 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 SMIM4Q8WVI0 70 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 TMEM68Q96MH6 324 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 NXF2Q9GZY0 626 aaKnown RBP13.06□□□□□ -0.32
SNCA-209ENST00000506244 KLK11Q9UBX7 282 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 FBXO7Q9Y3I1 522 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 NUBP2Q9Y5Y2 271 aa13.06□□□□□ -0.32
SNCA-209ENST00000506244 VWFP04275 2813 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 GPR31O00270 319 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 CTDSPLO15194 276 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 CD33P20138 364 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 GNRHRP30968 328 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 MMD2Q8IY49 270 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 SLC38A6Q8IZM9 456 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 TMEM229BQ8NBD8 167 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 OR51H1Q8NH63 302 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 C4orf3Q8WVX3 66 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 FAM103A1Q9BTL3 118 aaKnown RBP13.05□□□□□ -0.32
SNCA-209ENST00000506244 COMMD9Q9P000 198 aa13.05□□□□□ -0.32
SNCA-209ENST00000506244 M0QYG6 137 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 ARPC1BO15143 372 aaKnown RBP13.04□□□□□ -0.32
SNCA-209ENST00000506244 OR2A4O95047 310 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 RLN1P04808 185 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 S100A5P33763 92 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 UCP3P55916 312 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 TAS2R31P59538 309 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 DGCR2P98153 550 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 TNXAQ16473 311 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 IDO2Q6ZQW0 420 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 C8orf86Q6ZUL3 223 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 LFNGQ8NES3 379 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 MYOZ3Q8TDC0 251 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 RHOVQ96L33 236 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 OR2A7Q96R45 310 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 PHB2Q99623 299 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 SLA2Q9H6Q3 261 aa13.04□□□□□ -0.32
SNCA-209ENST00000506244 H3BUA1 57 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 KBTBD11O94819 623 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 HPRT1P00492 218 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 CD3DP04234 171 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 EGR2P11161 476 aaPredicted RBP13.03□□□□□ -0.32
SNCA-209ENST00000506244 MYCNOSP40205 109 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 PJVKQ0ZLH3 352 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 MEF2DQ14814 521 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 LCNL1Q6ZST4 164 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 OR4A5Q8NH83 315 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 SRSF12Q8WXF0 261 aaKnown RBP13.03□□□□□ -0.32
SNCA-209ENST00000506244 GPHA2Q96T91 129 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 ZNF430Q9H8G1 570 aaPredicted RBP13.03□□□□□ -0.32
SNCA-209ENST00000506244 PLEKHA2Q9HB19 425 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 NDUFA13Q9P0J0 144 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 VSIG4Q9Y279 399 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 PLXNB1O43157 2135 aa13.03□□□□□ -0.32
SNCA-209ENST00000506244 FABP12A6NFH5 140 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 MPPED1O15442 326 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 RAMP3O60896 148 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 RAB3DO95716 219 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 CD74P04233 296 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 NQO2P16083 231 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 F2RP25116 425 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 TNFSF8P32971 234 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 MAS1LP35410 378 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 RAB9AP51151 201 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 ERVK-16P61578 105 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 SSBP2P81877 361 aaPredicted RBP13.02□□□□□ -0.33
SNCA-209ENST00000506244 STEAP1BQ6NZ63 245 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 PUSL1Q8N0Z8 303 aaKnown RBP13.02□□□□□ -0.33
SNCA-209ENST00000506244 TMEM167AQ8TBQ9 72 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 ZNF486Q96H40 463 aaPredicted RBP13.02□□□□□ -0.33
SNCA-209ENST00000506244 SPIN2AQ99865 258 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 SPIN2BQ9BPZ2 258 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 RSRP1Q9BUV0 290 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 TINAGL1Q9GZM7 467 aaPredicted RBP13.02□□□□□ -0.33
SNCA-209ENST00000506244 BET1LQ9NYM9 111 aa13.02□□□□□ -0.33
SNCA-209ENST00000506244 GSTZ1O43708 216 aaPredicted RBP13.01□□□□□ -0.33
SNCA-209ENST00000506244 SOX15O60248 233 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms