RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 GTSCR1Q86UQ5 136 aa12.2□□□□□ -0.46
PDLIM7-213ENST00000505074 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-213ENST00000505074 TEX45Q8NA69 505 aa12.2□□□□□ -0.46
PDLIM7-213ENST00000505074 SRSF12Q8WXF0 261 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-213ENST00000505074 USMG5Q96IX5 58 aa12.2□□□□□ -0.46
PDLIM7-213ENST00000505074 ST6GALNAC5Q9BVH7 336 aa12.2□□□□□ -0.46
PDLIM7-213ENST00000505074 ADAM30Q9UKF2 790 aa12.2□□□□□ -0.46
PDLIM7-213ENST00000505074 ELF5Q9UKW6 265 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-213ENST00000505074 IGKV1D-8A0A087WSZ0 117 aa12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 FCGR3BO75015 233 aa12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 TUSC2O75896 110 aa12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 PSMB9P28065 219 aa12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 DYRK1AQ13627 763 aa12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 CDNFQ49AH0 187 aa12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 ZNF343Q6P1L6 599 aa12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 KCTD9Q7L273 389 aa12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 OSR1Q8TAX0 266 aaPredicted RBP12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 MRPS7Q9Y2R9 242 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 PRELID3BQ9Y3B1 194 aa12.19□□□□□ -0.46
PDLIM7-213ENST00000505074 PRH1P02810 166 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 SAA1P0DJI8 122 aaPredicted RBP12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 CD36P16671 472 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 NFYAP23511 347 aaPredicted RBP12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 DTYMKP23919 212 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 RHOGP84095 191 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 EXOSC2Q13868 293 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 LCN12Q6JVE5 192 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 ZNF645Q8N7E2 425 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 ADAD2Q8NCV1 583 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 NUDCD2Q8WVJ2 157 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 SNAPC3Q92966 411 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 TUBA4BQ9H853 241 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 ZNF430Q9H8G1 570 aaPredicted RBP12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 PEMTQ9UBM1 199 aa12.18□□□□□ -0.46
PDLIM7-213ENST00000505074 GNG2P59768 71 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 ATP5G2Q06055 141 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 CDK10Q15131 360 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 C10orf55Q5SWW7 151 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 Q6ZS49 121 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 NR2C2APQ86WQ0 139 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 SPIN2AQ99865 258 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 SPIN2BQ9BPZ2 258 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 AKIP1Q9NQ31 210 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 DAPK2Q9UIK4 370 aa12.17□□□□□ -0.46
PDLIM7-213ENST00000505074 DPPA5A6NC42 116 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 TMEM235A6NFC5 223 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 FAM223BA6NKX1 122 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 NOTOA8MTQ0 251 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 OR2A4O95047 310 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 BRI3O95415 125 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 CTXN2P0C2S0 81 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 GALP22466 123 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 GABARAPL2P60520 117 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 MRGPRG-AS1Q2M3A8 158 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 HACD4Q5VWC8 232 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 FAM223AQ8IWN6 122 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 MMD2Q8IY49 270 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 Q8N402 240 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 TCTEX1D2Q8WW35 142 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 RETNQ9HD89 108 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 RAB26Q9ULW5 256 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 SPATA2Q9UM82 520 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 OR2W1Q9Y3N9 320 aa12.16□□□□□ -0.46
PDLIM7-213ENST00000505074 RBMXL2O75526 392 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 SCGNO76038 276 aa12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 CSN3P07498 182 aa12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 IL34Q6ZMJ4 242 aa12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 VKORC1L1Q8N0U8 176 aa12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 OR4S2Q8NH73 311 aa12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 DYNLRB2Q8TF09 96 aa12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 TXNL4BQ9NX01 149 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 SSR3Q9UNL2 185 aa12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 RBMX2Q9Y388 322 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 RRP15Q9Y3B9 282 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-213ENST00000505074 OR2J3O76001 311 aa12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 SLC22A5O76082 557 aa12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 ARPC4P59998 168 aa12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 RPL30P62888 115 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 CNIH2Q6PI25 160 aa12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 SLC25A42Q86VD7 318 aa12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 LGALS14Q8TCE9 139 aa12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 FYTTD1Q96QD9 318 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 FAM110AQ9BQ89 295 aa12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 DCSTAMPQ9H295 470 aa12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 TAS2R8Q9NYW2 309 aa12.14□□□□□ -0.47
PDLIM7-213ENST00000505074 IGKV1D-13A0A0B4J2D9 117 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 IZUMO1RA6ND01 250 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 HMX3A6NHT5 357 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 BMPR1BO00238 502 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 HLA-DQB1P01920 261 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 IGKV1-13P0DP09 117 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 ZNF45Q02386 682 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 MXD1Q05195 221 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 C15orf32Q32M92 178 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 UBE2UQ5VVX9 321 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 NECAP1Q8NC96 275 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 VSTM2AQ8TAG5 236 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 HSD17B10Q99714 261 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 OR51E2Q9H255 320 aa12.13□□□□□ -0.47
PDLIM7-213ENST00000505074 HIPK2Q9H2X6 1198 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms