RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 TAF9BQ9HBM6 251 aa3.93□□□□□ -1.78
DEPDC1B-203ENST00000505017 RAB18Q9NP72 206 aa3.93□□□□□ -1.78
DEPDC1B-203ENST00000505017 CBLN4Q9NTU7 201 aa3.93□□□□□ -1.78
DEPDC1B-203ENST00000505017 TMEM106BQ9NUM4 274 aa3.93□□□□□ -1.78
DEPDC1B-203ENST00000505017 KAAG1Q9UBP8 84 aa3.93□□□□□ -1.78
DEPDC1B-203ENST00000505017 KIF25Q9UIL4 384 aa3.93□□□□□ -1.78
DEPDC1B-203ENST00000505017 KLF2Q9Y5W3 355 aaPredicted RBP3.93□□□□□ -1.78
DEPDC1B-203ENST00000505017 ITPR1Q14643 2758 aa3.93□□□□□ -1.78
DEPDC1B-203ENST00000505017 DOPEY1Q5JWR5 2465 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 DOCK11Q5JSL3 2073 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 PPIAL4EA0A075B759 164 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 IGKV1-6A0A0C4DH72 117 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 IGHV1-69-2A0A0G2JMI3 117 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 ODAMA1E959 279 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 RNF212BA8MTL3 300 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 HMSDA8MTL9 139 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 PPIAL4DF5H284 164 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 BET1O15155 118 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 CD8AP01732 235 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 SCTP09683 121 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 PPIAL4FP0DN26 164 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 RPS2P15880 293 aaKnown RBP3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 AKR1C4P17516 323 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 RCC1P18754 421 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 CXCL3P19876 107 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 DNASE1P24855 282 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 IL2RGP31785 369 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 CD80P33681 288 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 GABRA2P47869 451 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 PIGPP57054 158 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 CCL8P80075 99 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 MEF2CQ06413 473 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 CD300CQ08708 224 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 ATXN7L3Q14CW9 347 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 HERPUD1Q15011 391 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 IGFBP7Q16270 282 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 HFEQ30201 348 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 Q3ZCU0 254 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 IGSF11Q5DX21 431 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 CLEC18BQ6UXF7 455 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 OR10A7Q8NGE5 316 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 OR5T2Q8NGG2 359 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 OR52B4Q8NGK2 314 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 OR52M1Q8NGK5 317 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 OR2T35Q8NGX2 323 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 RTN4IP1Q8WWV3 396 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 CORO2AQ92828 525 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 IL22RA2Q969J5 263 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 TOMM40LQ969M1 308 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 TMEM230Q96A57 120 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 C18orf12Q96KH6 178 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 NMES1Q9C002 83 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 SHARPINQ9H0F6 387 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 NAA60Q9H7X0 242 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 LINC00574Q9H8X3 128 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 SLC2A9Q9NRM0 540 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 FAM212BQ9NTI7 297 aaPredicted RBP3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 PIPOXQ9P0Z9 390 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 JPT1Q9UK76 154 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 PPIAL4AQ9Y536 164 aa3.92□□□□□ -1.78
DEPDC1B-203ENST00000505017 USF3Q68DE3 2245 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 TRGV10A0A0A0MS01 117 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 IGHV3-64DA0A0J9YX35 117 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 hADV38S2A0JD32 116 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 ZNF729A6NN14 1252 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 A8MV72 311 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 C12orf77C9JDV5 145 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 H0Y980 276 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 C15orf65H3BRN8 121 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 GOSR2O14653 212 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 YPEL1O60688 119 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 CYB5R3P00387 301 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 IFNA21P01568 189 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 HBZP02008 142 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 DANCRP0C864 163 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 PET100P0DJ07 73 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 CGB3P0DN86 165 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 CGB7P0DN87 165 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 RPA2P15927 270 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 NFYAP23511 347 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 GNRHRP30968 328 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 NKX2-1P43699 371 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 UQCRFS1P47985 274 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 CEBPDP49716 269 aaPredicted RBP3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 RAB7AP51149 207 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 FXYD4P59646 89 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 CD81P60033 236 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 SUPT4H1P63272 117 aaKnown RBP3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 AESQ08117 197 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 BAMBIQ13145 260 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 SPRNQ5BIV9 151 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 LRRC10Q5BKY1 277 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 C11orf71Q6IPW1 123 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 IGSF10Q6WRI0 2623 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 LGI3Q8N145 548 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 UXS1Q8NBZ7 420 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 OR2T6Q8NHC8 308 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 CASTOR1Q8WTX7 329 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 ARL11Q969Q4 196 aa3.91□□□□□ -1.78
DEPDC1B-203ENST00000505017 RAB39BQ96DA2 213 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms