RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 RUNX1Q01196 453 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 EIF4EBP1Q13541 118 aaPredicted RBP19.71■□□□□ 0.75
PVT1-201ENST00000504719 TMEM177Q53S58 311 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 ZNF562Q6V9R5 426 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 TMEM17Q86X19 198 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 TCTEX1D1Q8N7M0 179 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 OR11H1Q8NG94 326 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 MCFD2Q8NI22 146 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 DIRAS2Q96HU8 199 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 HSD17B10Q99714 261 aaKnown RBP19.71■□□□□ 0.75
PVT1-201ENST00000504719 DCUN1D5Q9BTE7 237 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 TAS2R8Q9NYW2 309 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 KLK11Q9UBX7 282 aa19.71■□□□□ 0.75
PVT1-201ENST00000504719 A0A1W2PN81 502 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 TNFSF12O43508 249 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 SLC25A17O43808 307 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 SOX15O60248 233 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 CRYZL1O95825 349 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 CA2P00918 260 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 IGLV2-23P01705 113 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 CHRNA7P36544 502 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 LGALS7P47929 136 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 TMEM267Q0VDI3 215 aaPredicted RBP19.7■□□□□ 0.74
PVT1-201ENST00000504719 MSMO1Q15800 293 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 OR2B11Q5JQS5 317 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 ABHD5Q8WTS1 349 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 TCTEX1D2Q8WW35 142 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 GPHA2Q96T91 129 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 NXF2Q9GZY0 626 aaKnown RBP19.7■□□□□ 0.74
PVT1-201ENST00000504719 FOXA2Q9Y261 457 aaPredicted RBP19.7■□□□□ 0.74
PVT1-201ENST00000504719 PRELID3BQ9Y3B1 194 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 A3GALT2U3KPV4 340 aa19.7■□□□□ 0.74
PVT1-201ENST00000504719 FCGR3BO75015 233 aa19.69■□□□□ 0.74
PVT1-201ENST00000504719 PPP1R27Q86WC6 154 aa19.69■□□□□ 0.74
PVT1-201ENST00000504719 MFSD4AQ8N468 514 aa19.69■□□□□ 0.74
PVT1-201ENST00000504719 FCAMRQ8WWV6 532 aa19.69■□□□□ 0.74
PVT1-201ENST00000504719 TPSG1Q9NRR2 321 aa19.69■□□□□ 0.74
PVT1-201ENST00000504719 SRRM4A7MD48 611 aaKnown RBP19.68■□□□□ 0.74
PVT1-201ENST00000504719 ZNF701M0R085 212 aaPredicted RBP19.68■□□□□ 0.74
PVT1-201ENST00000504719 TSPAN5P62079 268 aa19.68■□□□□ 0.74
PVT1-201ENST00000504719 AKIRIN2Q53H80 203 aa19.68■□□□□ 0.74
PVT1-201ENST00000504719 ZNF66Q6ZN08 573 aa19.68■□□□□ 0.74
PVT1-201ENST00000504719 ZNF818PQ6ZRF7 136 aa19.68■□□□□ 0.74
PVT1-201ENST00000504719 ZBTB34Q8NCN2 500 aa19.68■□□□□ 0.74
PVT1-201ENST00000504719 OR6F1Q8NGZ6 308 aa19.68■□□□□ 0.74
PVT1-201ENST00000504719 MOB3AQ96BX8 217 aa19.68■□□□□ 0.74
PVT1-201ENST00000504719 FAM103A1Q9BTL3 118 aaKnown RBP19.68■□□□□ 0.74
PVT1-201ENST00000504719 MTFP1Q9UDX5 166 aa19.68■□□□□ 0.74
PVT1-201ENST00000504719 GNB1P62873 340 aa19.67■□□□□ 0.74
PVT1-201ENST00000504719 DGCR2P98153 550 aa19.67■□□□□ 0.74
PVT1-201ENST00000504719 IL18Q14116 193 aa19.67■□□□□ 0.74
PVT1-201ENST00000504719 UNQ5815/PRO19632Q6UWF5 114 aa19.67■□□□□ 0.74
PVT1-201ENST00000504719 OR1N2Q8NGR9 330 aa19.67■□□□□ 0.74
PVT1-201ENST00000504719 OR5B12Q96R08 314 aa19.67■□□□□ 0.74
PVT1-201ENST00000504719 GABARAPH6UMI1 98 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 M0QYG6 137 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 ARPC1BO15143 372 aaKnown RBP19.66■□□□□ 0.74
PVT1-201ENST00000504719 CRYGBP07316 175 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 OR8U8P0C7N1 319 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 GNRHRP30968 328 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 TNFSF8P32971 234 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 ACTBL2Q562R1 376 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 C9orf66Q5T8R8 295 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 ASPHD1Q5U4P2 390 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 PYHIN1Q6K0P9 492 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 LFNGQ8NES3 379 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 OSR1Q8TAX0 266 aaPredicted RBP19.66■□□□□ 0.74
PVT1-201ENST00000504719 CASTOR1Q8WTX7 329 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 FXYD6Q9H0Q3 95 aa19.66■□□□□ 0.74
PVT1-201ENST00000504719 ZMAT5Q9UDW3 170 aaKnown RBP19.66■□□□□ 0.74
PVT1-201ENST00000504719 BRWD1-AS2P59051 145 aa19.65■□□□□ 0.74
PVT1-201ENST00000504719 MRPS10P82664 201 aaKnown RBP19.65■□□□□ 0.74
PVT1-201ENST00000504719 ZNF616Q08AN1 781 aa19.65■□□□□ 0.74
PVT1-201ENST00000504719 FXYD3Q14802 87 aa19.65■□□□□ 0.74
PVT1-201ENST00000504719 DEFB121Q5J5C9 76 aa19.65■□□□□ 0.74
PVT1-201ENST00000504719 OR4S2Q8NH73 311 aa19.65■□□□□ 0.74
PVT1-201ENST00000504719 ARPC1AQ92747 370 aa19.65■□□□□ 0.74
PVT1-201ENST00000504719 CD3DP04234 171 aa19.64■□□□□ 0.73
PVT1-201ENST00000504719 UBE2KP61086 200 aa19.64■□□□□ 0.73
PVT1-201ENST00000504719 PJVKQ0ZLH3 352 aa19.64■□□□□ 0.73
PVT1-201ENST00000504719 VMA21Q3ZAQ7 101 aa19.64■□□□□ 0.73
PVT1-201ENST00000504719 VAX1Q5SQQ9 334 aa19.64■□□□□ 0.73
PVT1-201ENST00000504719 BORCS5Q969J3 196 aa19.64■□□□□ 0.73
PVT1-201ENST00000504719 RABL2AQ9UBK7 228 aaPredicted RBP19.64■□□□□ 0.73
PVT1-201ENST00000504719 RABL2BQ9UNT1 228 aa19.64■□□□□ 0.73
PVT1-201ENST00000504719 SEC14L6B5MCN3 397 aa19.63■□□□□ 0.73
PVT1-201ENST00000504719 SSBP2P81877 361 aaPredicted RBP19.63■□□□□ 0.73
PVT1-201ENST00000504719 RNASE10Q5GAN6 216 aaKnown RBP19.63■□□□□ 0.73
PVT1-201ENST00000504719 SMIM4Q8WVI0 70 aa19.63■□□□□ 0.73
PVT1-201ENST00000504719 TINAGL1Q9GZM7 467 aaPredicted RBP19.63■□□□□ 0.73
PVT1-201ENST00000504719 ALX4Q9H161 411 aaPredicted RBP19.63■□□□□ 0.73
PVT1-201ENST00000504719 FABP12A6NFH5 140 aa19.62■□□□□ 0.73
PVT1-201ENST00000504719 CTDSPLO15194 276 aa19.62■□□□□ 0.73
PVT1-201ENST00000504719 RAMP3O60896 148 aa19.62■□□□□ 0.73
PVT1-201ENST00000504719 IFNA6P05013 189 aa19.62■□□□□ 0.73
PVT1-201ENST00000504719 KIR2DS2P43631 304 aa19.62■□□□□ 0.73
PVT1-201ENST00000504719 CATR1Q13166 79 aa19.62■□□□□ 0.73
PVT1-201ENST00000504719 IDO2Q6ZQW0 420 aa19.62■□□□□ 0.73
PVT1-201ENST00000504719 TEX45Q8NA69 505 aa19.62■□□□□ 0.73
PVT1-201ENST00000504719 TMEM229BQ8NBD8 167 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms