RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 EHFQ9NZC4 300 aa16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 ZMAT5Q9UDW3 170 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-203ENST00000504526 HERV-K104P61576 105 aa16.45■□□□□ 0.22
TRAPPC11-203ENST00000504526 DYRK1AQ13627 763 aa16.45■□□□□ 0.22
TRAPPC11-203ENST00000504526 OR2B11Q5JQS5 317 aa16.45■□□□□ 0.22
TRAPPC11-203ENST00000504526 OR1N2Q8NGR9 330 aa16.45■□□□□ 0.22
TRAPPC11-203ENST00000504526 OR5H2Q8NGV7 314 aa16.45■□□□□ 0.22
TRAPPC11-203ENST00000504526 GPX8Q8TED1 209 aa16.45■□□□□ 0.22
TRAPPC11-203ENST00000504526 AURKAIP1Q9NWT8 199 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC11-203ENST00000504526 HPGDSO60760 199 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 ACTL6BO94805 426 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 PRB2P02812 416 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 SAA1P0DJI8 122 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 ELK1P19419 428 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 TPPP2P59282 170 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 FXYD4P59646 89 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 ZNF616Q08AN1 781 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 EGFEM1PQ0D2K5 195 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 CATR1Q13166 79 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 MRGPRG-AS1Q2M3A8 158 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 DHRS11Q6UWP2 260 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 MMD2Q8IY49 270 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 POC5Q8NA72 575 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 OR5B12Q96R08 314 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 PHB2Q99623 299 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 AIFM2Q9BRQ8 373 aa16.44■□□□□ 0.22
TRAPPC11-203ENST00000504526 FAM25AB3EWG3 89 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 FAM25CB3EWG5 89 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 FAM25GB3EWG6 89 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 SULT1C2O00338 296 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 BRI3O95415 125 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 LGALS1P09382 135 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 TNXAQ16473 311 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 IDO2Q6ZQW0 420 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 MS4A10Q96PG2 267 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 ZNF355PQ9NSJ1 428 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 ADAM30Q9UKF2 790 aa16.43■□□□□ 0.22
TRAPPC11-203ENST00000504526 RBFOX2O43251 390 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 TPPPO94811 219 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 HRASP01112 189 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 PMP2P02689 132 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 TRGV3P03979 118 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 RFX2P48378 723 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 C9orf66Q5T8R8 295 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 TMEM17Q86X19 198 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 SNX29P2Q8IUI4 249 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 CASTOR1Q8WTX7 329 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 SRSF12Q8WXF0 261 aaKnown RBP16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 MOB3AQ96BX8 217 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 RHOVQ96L33 236 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 BCL7BQ9BQE9 202 aa16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 ZNF2Q9BSG1 426 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 ZNF430Q9H8G1 570 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-203ENST00000504526 A0A0G2JLM5 398 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 MSGN1A6NI15 193 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 TNFSF12O43508 249 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 OR2A4O95047 310 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 RCVRNP35243 200 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 BRWD1-AS2P59051 145 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 SPAG16Q8N0X2 631 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 OR5T1Q8NG75 326 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 OR6F1Q8NGZ6 308 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 MRAPQ8TCY5 172 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 CD300LFQ8TDQ1 290 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 RAB2BQ8WUD1 216 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 OR2A7Q96R45 310 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 SPIN2AQ99865 258 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 SPIN2BQ9BPZ2 258 aa16.41■□□□□ 0.22
TRAPPC11-203ENST00000504526 LINC01619G3V211 115 aa16.4■□□□□ 0.22
TRAPPC11-203ENST00000504526 HOXD3P31249 432 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC11-203ENST00000504526 ASPHD1Q5U4P2 390 aa16.4■□□□□ 0.22
TRAPPC11-203ENST00000504526 ZNF818PQ6ZRF7 136 aa16.4■□□□□ 0.22
TRAPPC11-203ENST00000504526 CLVS1Q8IUQ0 354 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC11-203ENST00000504526 LYSMD2Q8IV50 215 aa16.4■□□□□ 0.22
TRAPPC11-203ENST00000504526 TMEM167AQ8TBQ9 72 aa16.4■□□□□ 0.22
TRAPPC11-203ENST00000504526 C15orf40Q8WUR7 153 aa16.4■□□□□ 0.22
TRAPPC11-203ENST00000504526 MPPED1O15442 326 aa16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 KBTBD11O94819 623 aa16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 HLA-DMAP28067 261 aa16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 GNRHRP30968 328 aa16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 HRH1P35367 487 aa16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 MAS1LP35410 378 aa16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 RPL5P46777 297 aaKnown RBP16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 TMBIM6P55061 237 aa16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 PUSL1Q8N0Z8 303 aaKnown RBP16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 GPHA2Q96T91 129 aa16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 TINAGL1Q9GZM7 467 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC11-203ENST00000504526 C13orf42A0A1B0GVH6 325 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 SEC14L6B5MCN3 397 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 HPRT1P00492 218 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 IGHV3-11P01762 117 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 HSPB1P04792 205 aaKnown RBP16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 OR9G9P0C7N8 305 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 INSL3P51460 131 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 KRTAP10-11P60412 298 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 AADACL3Q5VUY0 350 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 LPCAT3Q6P1A2 487 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 CMTM1Q8IZ96 169 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 VKORC1L1Q8N0U8 176 aa16.38■□□□□ 0.21
TRAPPC11-203ENST00000504526 OR4A5Q8NH83 315 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms