RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 C2orf83Q53S99 150 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 RPL39P5Q59GN2 51 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 TIMM23BQ5SRD1 257 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 FAM74A4Q5TZK3 123 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 RHOVQ96L33 236 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 POLR2AP24928 1970 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 TRIP12Q14669 1992 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 GCGP01275 180 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 ARL6IP6Q8N6S5 226 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 FAM168AQ92567 244 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 ELF5Q9UKW6 265 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 CHCHD2Q9Y6H1 151 aaPredicted RBP6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 A6NJY4 79 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 GDF9O60383 454 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 MOSP00540 346 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF883P0CG24 379 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 TNFSF10P50591 281 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 CD69Q07108 199 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 TMEM187Q14656 261 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 DNM1P46Q6ZS02 220 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 SRSF12Q8WXF0 261 aaKnown RBP6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 CHRNA10Q9GZZ6 450 aa6.12□□□□□ -1.43
SYNPO2-205ENST00000504178 GCM2O75603 506 aaPredicted RBP6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 UQCRFS1P47985 274 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 PKIAP61925 76 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 SPATA45Q537H7 98 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 ASPHD2Q6ICH7 369 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 RTN4RL2Q86UN3 420 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 CTHRC1Q96CG8 243 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 SMDT1Q9H4I9 107 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 HSPB1P04792 205 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 CRYBA2P53672 197 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 NEU1Q99519 415 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 A0A0G2JMM0 328 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 A0A1W2PPB8 328 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 A0A1W2PRS3 328 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 FOXI3A8MTJ6 420 aaPredicted RBP6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 KIR3DP1A8MWS1 328 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 PPP1R17O96001 155 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 IGKV1D-33P01593 117 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 IGKV1-33P01594 117 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 CEACAM1P13688 526 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 KLK2P20151 261 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 COPS9Q8WXC6 57 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 ABHD17AQ96GS6 310 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 RARRES2Q99969 163 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 TXNDC17Q9BRA2 123 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 SH3BGRL3Q9H299 93 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 YAE1D1Q9NRH1 226 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 TCF19Q9Y242 345 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 CYP2G1PQ6ZSU1 146 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 OR51G1Q8NGK1 321 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 SMIM8Q96KF7 97 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 J3QW42 95 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 IL4P05112 153 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 LINC00305Q7Z4B0 112 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 DRAM1Q8N682 238 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNRF1Q8ND25 227 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 SLC25A38Q96DW6 304 aa6.11□□□□□ -1.43
SYNPO2-205ENST00000504178 A0A0B4J293 547 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 LOC390937A0A1W2PQ73 354 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 A0A1W2PRX2 142 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 MT-ND6P03923 174 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 TRGC1P0CF51 173 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 MEIG1Q5JSS6 88 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 C1QTNF12Q5T7M4 302 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 FAM159AQ6UWV7 190 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 C5orf66Q9H5L9 145 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF256Q9Y2P7 627 aaPredicted RBP6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 PLXNA1Q9UIW2 1896 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 LOC102724200A0A096LPH7 203 aaPredicted RBP6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 RPS11P62280 158 aaKnown RBP eCLIP6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 EGR4Q05215 589 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 PSME4Q14997 1843 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 CECR9P0C854 216 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 CRYBB3P26998 211 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 SPSB4Q96A44 273 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 TP53RKQ96S44 253 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 HSPB9Q9BQS6 159 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 PPP1R3EQ9H7J1 279 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF646O15015 1829 aaPredicted RBP6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 TGIF2-C20orf24A0A0A6YYL0 155 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 IGHV2OR16-5A0A0B4J2B6 119 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 C7orf66A4D0T2 115 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 PPP1R27Q86WC6 154 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 LHFPL5Q8TAF8 219 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 ITLN2Q8WWU7 325 aaPredicted RBP6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 C19orf24Q9BVV8 132 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 TM4SF5O14894 197 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 ZIC3O60481 467 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 IGHV3-48P01763 117 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 COX6CP09669 75 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 SMIM6P0DI80 62 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF250P15622 560 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 ZNF708P17019 499 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 MEF2BQ02080 365 aaPredicted RBP6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 SMUG1Q53HV7 270 aa6.1□□□□□ -1.43
SYNPO2-205ENST00000504178 GOLT1AQ6ZVE7 132 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms