RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 TMEM133Q9H2Q1 129 aa5.03□□□□□ -1.6
LINC01340-201ENST00000504012 R3HDMLQ9H3Y0 253 aa5.03□□□□□ -1.6
LINC01340-201ENST00000504012 FAM60AQ9NP50 221 aa5.03□□□□□ -1.6
LINC01340-201ENST00000504012 SPANXB1Q9NS25 103 aaPredicted RBP5.03□□□□□ -1.6
LINC01340-201ENST00000504012 HIF1ANQ9NWT6 349 aa5.03□□□□□ -1.6
LINC01340-201ENST00000504012 THYN1Q9P016 225 aa5.03□□□□□ -1.6
LINC01340-201ENST00000504012 COA3Q9Y2R0 106 aaPredicted RBP5.03□□□□□ -1.6
LINC01340-201ENST00000504012 TSSC4Q9Y5U2 329 aaPredicted RBP5.03□□□□□ -1.6
LINC01340-201ENST00000504012 SPCS1Q9Y6A9 102 aa5.03□□□□□ -1.6
LINC01340-201ENST00000504012 V9GYV3 84 aa5.03□□□□□ -1.6
LINC01340-201ENST00000504012 TRPM6Q9BX84 2022 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 KIAA1549LQ6ZVL6 1849 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 DOCK9Q9BZ29 2069 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 IGKV1-9A0A0C4DH69 117 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 IZUMO1RA6ND01 250 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A10PA6NDY2 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A18PA6NE21 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A16PA6NEW6 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A20PA6NIJ5 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A8PA6NJQ4 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A7PA6NKC0 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A22PA8MWA6 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A12PA8MX19 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A5PA8MXJ8 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A23PA8MXZ1 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 A8MZ25 164 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 ISLRO14498 428 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 TNFRSF13BO14836 293 aaPredicted RBP5.02□□□□□ -1.61
LINC01340-201ENST00000504012 HMGB3O15347 200 aaKnown RBP5.02□□□□□ -1.61
LINC01340-201ENST00000504012 DHHO43323 396 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 TNFSF14O43557 240 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 OR7C1O76099 320 aaPredicted RBP5.02□□□□□ -1.61
LINC01340-201ENST00000504012 CLDN1O95832 211 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 NAPSAO96009 420 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A15PP0C7V4 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A13PP0C7W8 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A14PP0C7W9 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM90A24PP0C7X0 464 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 SRIP30626 198 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 LTBRP36941 435 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 GATA4P43694 442 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 GPR1P46091 355 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 DAP3P51398 398 aaKnown RBP5.02□□□□□ -1.61
LINC01340-201ENST00000504012 CLDN17P56750 224 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 SLC38A11Q08AI6 406 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 TNXAQ16473 311 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 NRN1LQ496H8 165 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 TMEM52BQ4KMG9 183 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 TSPO2Q5TGU0 170 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 CRIP3Q6Q6R5 217 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 FAM180AQ6UWF9 173 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 RSPO2Q6UXX9 243 aaPredicted RBP5.02□□□□□ -1.61
LINC01340-201ENST00000504012 C2orf91Q6ZV80 131 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 C6orf201Q7Z4U5 140 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 C1orf210Q8IVY1 113 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 SUMF1Q8NBK3 374 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 VN1R2Q8NFZ6 395 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 OR4C3Q8NH37 302 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 C8orf46Q8TAG6 207 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 ZNF502Q8TBZ5 544 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 BLNKQ8WV28 456 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 ZNF501Q96CX3 271 aaPredicted RBP5.02□□□□□ -1.61
LINC01340-201ENST00000504012 HARBI1Q96MB7 349 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 RCHY1Q96PM5 261 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 TRIB1Q96RU8 372 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 VGLL1Q99990 258 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 GGTLC1Q9BX51 225 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 MED29Q9NX70 200 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 SLC25A10Q9UBX3 287 aaPredicted RBP5.02□□□□□ -1.61
LINC01340-201ENST00000504012 COL4A6Q14031 1691 aa5.02□□□□□ -1.61
LINC01340-201ENST00000504012 DOCK8Q8NF50 2099 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 A0A1W2PP11 408 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 H3BUT2 72 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 KLK10O43240 276 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 ANGPTL7O43827 346 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 MPDU1O75352 247 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 CD27P26842 260 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 GPR12P47775 334 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 FXYD4P59646 89 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 GRB2P62993 217 aaKnown RBP5.01□□□□□ -1.61
LINC01340-201ENST00000504012 DLX2Q07687 328 aaPredicted RBP5.01□□□□□ -1.61
LINC01340-201ENST00000504012 KLRD1Q13241 179 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 NUMA1Q14980 2115 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 PDLIM3Q53GG5 364 aaPredicted RBP5.01□□□□□ -1.61
LINC01340-201ENST00000504012 FAM69BQ5VUD6 431 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 ZNF562Q6V9R5 426 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 ADAMTSL5Q6ZMM2 481 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 C8orf86Q6ZUL3 223 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 VN1R4Q7Z5H5 301 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 ATOH7Q8N100 152 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 TMEM251Q8N6I4 163 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 TPRX1Q8N7U7 411 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 ZNF114Q8NC26 417 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 OR10X1Q8NGY0 326 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 H1FXQ92522 213 aaKnown RBP5.01□□□□□ -1.61
LINC01340-201ENST00000504012 RDH5Q92781 318 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 NUS1Q96E22 293 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 PERPQ96FX8 193 aa5.01□□□□□ -1.61
LINC01340-201ENST00000504012 C1orf159Q96HA4 380 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms