RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 hCG_1809904A0A1W2PP81 198 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A1W2PPE2 198 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A1W2PR64 198 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 A0A1W2PRV1 198 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 TOR1AO14656 332 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 TOX4O94842 621 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 AVPP01185 164 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 IGLV2-23P01705 113 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 ARG1P05089 322 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 MSMBP08118 114 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 HKR1P10072 659 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 MYOD1P15172 320 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 USF1P22415 310 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 NKX2-1P43699 371 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 PRRX1P54821 245 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 PAX9P55771 341 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 OR2B8PP59922 312 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 POLR2GP62487 172 aaKnown RBP eCLIP5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 RELBQ01201 579 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 FGL1Q08830 312 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 TMEM177Q53S58 311 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 OR4A47Q6IF82 309 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 SSX9Q7RTT3 188 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 ZNF546Q86UE3 836 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 TGIF2LXQ8IUE1 241 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 MAPK1IP1LQ8NDC0 245 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 THAP6Q8TBB0 222 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 CD300LFQ8TDQ1 290 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 DCUN1D4Q92564 292 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 AQP10Q96PS8 301 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 SPIN2AQ99865 258 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 SPIN2BQ9BPZ2 258 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 PCGF1Q9BSM1 259 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 TMEM140Q9NV12 185 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 COA4Q9NYJ1 87 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 NSG2Q9Y328 171 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 PRELID3BQ9Y3B1 194 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 PLXNB1O43157 2135 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 ZFHX3Q15911 3703 aa5.56□□□□□ -1.52
TOPBP1-203ENST00000503464 CENPVL3A0A0U1RRI6 287 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 IGSF23A1L1A6 192 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 L7N2F9 121 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 TIMM23O14925 209 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 ST8SIA3O43173 380 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 SSSCA1O60232 199 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 SAA1P0DJI8 122 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 NQO2P16083 231 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 IL3RAP26951 378 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 CNTFRP26992 372 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 HTR1DP28221 377 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 UBE2E1P51965 193 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 AP2S1P53680 142 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 TNFRSF9Q07011 255 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 LOXL1Q08397 574 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 HABP2Q14520 560 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 ZNF345Q14585 488 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 RTL8BQ17RB0 113 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 THOC7Q6I9Y2 204 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 DHRS7BQ6IAN0 325 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 TMUB2Q71RG4 321 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 PDPNQ86YL7 162 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 PUSL1Q8N0Z8 303 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 KCNRGQ8N5I3 272 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 RNASE11Q8TAA1 199 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 LHX4Q969G2 390 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 RHOVQ96L33 236 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 QTRT1Q9BXR0 403 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 MFFQ9GZY8 342 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 TPSG1Q9NRR2 321 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 DPM3Q9P2X0 92 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 HSPB7Q9UBY9 170 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 WASHC3Q9Y3C0 194 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 AMMECR1Q9Y4X0 333 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 ITPR2Q14571 2701 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 ITPR3Q14573 2671 aa5.55□□□□□ -1.52
TOPBP1-203ENST00000503464 CELSR1Q9NYQ6 3014 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 ZANQ9Y493 2812 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 HECTD1Q9ULT8 2610 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 NAV3Q8IVL0 2385 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 PIGBOS1A0A0B4J2F0 54 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 FAM90A9PA6NNJ1 464 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 C15orf61A6NNL5 157 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 LEUTXA8MZ59 168 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 E5RGE8 158 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 UPK2O00526 184 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 CHST1O43916 411 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 VENTXO95231 258 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 CFDP00746 253 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 APOA2P02652 100 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 GAPDHP04406 335 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 CRYGBP07316 175 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 PET100P0DJ07 73 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 IGHV4-31P0DP07 118 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 RRASP10301 218 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 S100A11P31949 105 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 SAA4P35542 130 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 TAGLNQ01995 201 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 OPCMLQ14982 345 aa5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 PDLIM3Q53GG5 364 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-203ENST00000503464 SPINK9Q5DT21 86 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms