RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 IGHV3-7P01780 117 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 OPN1MWP04001 364 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 OPN1MW2P0DN77 364 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 OPN1MW3P0DN78 364 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 C17orf58Q2M2W7 97 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 KRTCAP3Q53RY4 240 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 SLC16A13Q7RTY0 426 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 RBMXL3Q8N7X1 1067 aaKnown RBP13.7□□□□□ -0.22
VCAN-204ENST00000502527 NANPQ8TBE9 248 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 GFOD1Q9NXC2 390 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 IL19Q9UHD0 177 aa13.7□□□□□ -0.22
VCAN-204ENST00000502527 TRGV10A0A0A0MS01 117 aa13.69□□□□□ -0.22
VCAN-204ENST00000502527 HOXA5P20719 270 aa13.69□□□□□ -0.22
VCAN-204ENST00000502527 VDAC2P45880 294 aaPredicted RBP13.69□□□□□ -0.22
VCAN-204ENST00000502527 CDC34P49427 236 aaPredicted RBP13.69□□□□□ -0.22
VCAN-204ENST00000502527 TNFAIP6P98066 277 aaPredicted RBP13.69□□□□□ -0.22
VCAN-204ENST00000502527 RELBQ01201 579 aa13.69□□□□□ -0.22
VCAN-204ENST00000502527 TLE1Q04724 770 aa13.69□□□□□ -0.22
VCAN-204ENST00000502527 FAM201AQ5SY85 155 aa13.69□□□□□ -0.22
VCAN-204ENST00000502527 VKORC1L1Q8N0U8 176 aa13.69□□□□□ -0.22
VCAN-204ENST00000502527 DDB2Q92466 427 aa13.69□□□□□ -0.22
VCAN-204ENST00000502527 GCM1Q9NP62 436 aa13.69□□□□□ -0.22
VCAN-204ENST00000502527 TMEM140Q9NV12 185 aa13.69□□□□□ -0.22
VCAN-204ENST00000502527 DIDO1Q9BTC0 2240 aaKnown RBP13.69□□□□□ -0.22
VCAN-204ENST00000502527 SLC31A2O15432 143 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 CLN5O75503 358 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 TNFSF4P23510 183 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 ADIRFQ15847 76 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 OR4F5Q8NH21 305 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 FAM57AQ8TBR7 257 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 RPUSD4Q96CM3 377 aaKnown RBP13.68□□□□□ -0.22
VCAN-204ENST00000502527 OR4F4Q96R69 305 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 DSPP15924 2871 aaKnown RBP13.68□□□□□ -0.22
VCAN-204ENST00000502527 A8MXE2 369 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 SEC14L6B5MCN3 397 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 IGHV1-46P01743 117 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 SELLP14151 372 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 PLA2G5P39877 138 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 FAM27E3Q08E93 113 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 CT45A1Q5HYN5 189 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 NCMAPQ5T1S8 102 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 STUMQ69YW2 141 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 Q8N7P7 452 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 CT45A3Q8NHU0 189 aa13.68□□□□□ -0.22
VCAN-204ENST00000502527 TRBV24-1A0A075B6N3 115 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 SMCO3A2RU48 225 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 CD40P25942 277 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 THBS3P49746 956 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 NDUFA6P56556 154 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 TMPRSS3P57727 454 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 LEAP2Q969E1 77 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 DOK5Q9P104 306 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 TRAV3A0A0B4J244 114 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 K7EM74 188 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 RRHO14718 337 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 GFRA3O60609 400 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 TRGC2P03986 189 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 CDX1P47902 265 aaPredicted RBP13.67□□□□□ -0.22
VCAN-204ENST00000502527 TMEM249Q2WGJ8 235 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 BSXQ3C1V8 233 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 GATAD1Q8WUU5 269 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 NEIL1Q96FI4 390 aaPredicted RBP13.67□□□□□ -0.22
VCAN-204ENST00000502527 ADTRPQ96IZ2 230 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 PARLQ9H300 379 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 TCF19Q9Y242 345 aa13.67□□□□□ -0.22
VCAN-204ENST00000502527 CNOT1A5YKK6 2376 aaKnown RBP13.66□□□□□ -0.22
VCAN-204ENST00000502527 SAA2-SAA4A0A096LPE2 208 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 TRGV8A0A0C4DH27 118 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 KLK10O43240 276 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST1H2BKO60814 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 PAGE4O60829 102 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST1H2BJP06899 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 SAA2P0DJI9 122 aaPredicted RBP13.66□□□□□ -0.22
VCAN-204ENST00000502527 BMP5P22003 454 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST1H2BOP23527 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST1H2BBP33778 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 OPRK1P41145 380 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST1H2BDP58876 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST1H2BCP62807 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST2H2BEQ16778 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.66□□□□□ -0.22
VCAN-204ENST00000502527 C1orf229Q6ZS94 237 aaPredicted RBP13.66□□□□□ -0.22
VCAN-204ENST00000502527 RAB1CQ92928 201 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST1H2BHQ93079 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 GAFA1Q96PS6 74 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST1H2BNQ99877 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 HIST1H2BMQ99879 126 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 SVILO95425 2214 aa13.66□□□□□ -0.22
VCAN-204ENST00000502527 A0A1W2PPV4 95 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 YIF1AO95070 293 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 RPL23P62829 140 aaKnown RBP13.65□□□□□ -0.22
VCAN-204ENST00000502527 MRPS11P82912 194 aaKnown RBP13.65□□□□□ -0.22
VCAN-204ENST00000502527 TREML4Q6UXN2 200 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 DEFB108BQ8NET1 73 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 RHOVQ96L33 236 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 SSX3Q99909 188 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 NIT2Q9NQR4 276 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 ZNF318Q5VUA4 2279 aa13.65□□□□□ -0.22
VCAN-204ENST00000502527 ZNF729A6NN14 1252 aaPredicted RBP13.65□□□□□ -0.22
VCAN-204ENST00000502527 C15orf61A6NNL5 157 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms