RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 B9D2Q9BPU9 175 aa12.4□□□□□ -0.42
NR1H3-227ENST00000498548 ZNF430Q9H8G1 570 aaPredicted RBP12.4□□□□□ -0.42
NR1H3-227ENST00000498548 TAS2R8Q9NYW2 309 aa12.4□□□□□ -0.42
NR1H3-227ENST00000498548 PRELID3BQ9Y3B1 194 aa12.4□□□□□ -0.42
NR1H3-227ENST00000498548 LSM4Q9Y4Z0 139 aaKnown RBP12.4□□□□□ -0.42
NR1H3-227ENST00000498548 A6NHS1 94 aa12.39□□□□□ -0.43
NR1H3-227ENST00000498548 RBMXL2O75526 392 aaKnown RBP12.39□□□□□ -0.43
NR1H3-227ENST00000498548 PRH1P02810 166 aa12.39□□□□□ -0.43
NR1H3-227ENST00000498548 BRWD1-AS2P59051 145 aa12.39□□□□□ -0.43
NR1H3-227ENST00000498548 CDK10Q15131 360 aa12.39□□□□□ -0.43
NR1H3-227ENST00000498548 C10orf55Q5SWW7 151 aa12.39□□□□□ -0.43
NR1H3-227ENST00000498548 HAPLN4Q86UW8 402 aa12.39□□□□□ -0.43
NR1H3-227ENST00000498548 SRSF12Q8WXF0 261 aaKnown RBP12.39□□□□□ -0.43
NR1H3-227ENST00000498548 TINAGL1Q9GZM7 467 aaPredicted RBP12.39□□□□□ -0.43
NR1H3-227ENST00000498548 VCX3AQ9NNX9 186 aa12.39□□□□□ -0.43
NR1H3-227ENST00000498548 ZNF256Q9Y2P7 627 aaPredicted RBP12.39□□□□□ -0.43
NR1H3-227ENST00000498548 A0A0A6YYH2 397 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 A6NJ64 397 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 H3BUA1 57 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 MPPED1O15442 326 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 XRCC3O43542 346 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 SLC22A5O76082 557 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 SPNP16150 400 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 INSL3P51460 131 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 FXYD4P59646 89 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 VAX1Q5SQQ9 334 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 ZNF429Q86V71 674 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 SNAPC3Q92966 411 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 S100A16Q96FQ6 103 aaKnown RBP12.38□□□□□ -0.43
NR1H3-227ENST00000498548 TMEM68Q96MH6 324 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 HSD17B10Q99714 261 aaKnown RBP12.38□□□□□ -0.43
NR1H3-227ENST00000498548 ASCL2Q99929 193 aa12.38□□□□□ -0.43
NR1H3-227ENST00000498548 MRPS7Q9Y2R9 242 aaKnown RBP12.38□□□□□ -0.43
NR1H3-227ENST00000498548 HMX3A6NHT5 357 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 PPYP01298 95 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 NCS1P62166 190 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 DYRK1AQ13627 763 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 UBE2NLQ5JXB2 153 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 SSX9Q7RTT3 188 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 OVCH2Q7RTZ1 564 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 SAMD12Q8N8I0 201 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 ADAD2Q8NCV1 583 aaKnown RBP12.37□□□□□ -0.43
NR1H3-227ENST00000498548 OR13F1Q8NGS4 319 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 SLC5A7Q9GZV3 580 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 RANGRFQ9HD47 186 aaPredicted RBP12.37□□□□□ -0.43
NR1H3-227ENST00000498548 ADAM30Q9UKF2 790 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 SORL1Q92673 2214 aa12.37□□□□□ -0.43
NR1H3-227ENST00000498548 A0A0G2JLM5 398 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 ACTL6BO94805 426 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 MYOD1P15172 320 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 TAS2R20P59543 309 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 VBP1P61758 197 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 ZNF66Q6ZN08 573 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 C19orf35Q6ZS72 473 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 CROCCP3Q8IVE0 287 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 MMD2Q8IY49 270 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 OR4S2Q8NH73 311 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 FUNDC2Q9BWH2 189 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 IFT46Q9NQC8 304 aa12.36□□□□□ -0.43
NR1H3-227ENST00000498548 TRIM64CA6NLI5 447 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 E7EUB6 86 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 TMEM127O75204 238 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 OR2A4O95047 310 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 PMP2P02689 132 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 EIF4EP06730 217 aaKnown RBP12.35□□□□□ -0.43
NR1H3-227ENST00000498548 CBX5P45973 191 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 ZNF45Q02386 682 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 DCTN2Q13561 401 aaKnown RBP12.35□□□□□ -0.43
NR1H3-227ENST00000498548 TMEM69Q5SWH9 247 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 PUSL1Q8N0Z8 303 aaKnown RBP12.35□□□□□ -0.43
NR1H3-227ENST00000498548 OR2A7Q96R45 310 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 OR4C12Q96R67 309 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 RSRP1Q9BUV0 290 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 COMMD3Q9UBI1 195 aa12.35□□□□□ -0.43
NR1H3-227ENST00000498548 PEF1Q9UBV8 284 aaKnown RBP12.35□□□□□ -0.43
NR1H3-227ENST00000498548 SULT1C2O00338 296 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 KBTBD11O94819 623 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 RFX2P48378 723 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 ZNF343Q6P1L6 599 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 ZNF818PQ6ZRF7 136 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 TMEM17Q86X19 198 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 SPAG16Q8N0X2 631 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 GIMAP1Q8WWP7 306 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 SLC25A46Q96AG3 418 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 FYTTD1Q96QD9 318 aaKnown RBP12.34□□□□□ -0.43
NR1H3-227ENST00000498548 AKIP1Q9NQ31 210 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 EHFQ9NZC4 300 aa12.34□□□□□ -0.43
NR1H3-227ENST00000498548 A0A1B0GW64 132 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 TEX22C9J3V5 150 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 BRI3O95415 125 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 IL6RP08887 468 aaPredicted RBP12.33□□□□□ -0.44
NR1H3-227ENST00000498548 GP9P14770 177 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 ZP3P21754 424 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 RPL27AP46776 148 aaKnown RBP12.33□□□□□ -0.44
NR1H3-227ENST00000498548 SYNJ2BPP57105 145 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 RHOGP84095 191 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms