RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MSGN1A6NI15 193 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 A6NJ64 397 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 CREBL2O60519 120 aaPredicted RBP6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 TMEM127O75204 238 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 ACTL6BO94805 426 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 BRI3O95415 125 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 IGLV2-14P01704 120 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 NHLRC4P0CG21 123 aaPredicted RBP6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 SAA1P0DJI8 122 aaPredicted RBP6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 APELAP0DMC3 54 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 IGKV1-13P0DP09 117 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 ZP3P21754 424 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 AADACP22760 399 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 ARPC4P59998 168 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 RPL30P62888 115 aaKnown RBP6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 DEFA5Q01523 94 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 CDK10Q15131 360 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 PRSS8Q16651 343 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 OR2B11Q5JQS5 317 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 OVCH2Q7RTZ1 564 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 OR6Q1Q8NGQ2 317 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 TCTEX1D2Q8WW35 142 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 SRSF12Q8WXF0 261 aaKnown RBP6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 OR4C12Q96R67 309 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 HSD17B10Q99714 261 aaKnown RBP6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 TINAGL1Q9GZM7 467 aaPredicted RBP6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 RANGRFQ9HD47 186 aaPredicted RBP6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 DIABLOQ9NR28 239 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 SMAD5-AS1Q9Y6J3 95 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 COL7A1Q02388 2944 aa6.52□□□□□ -1.37
HMGXB4-207ENST00000498212 MPPED1O15442 326 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 OR9G9P0C7N8 305 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 GP9P14770 177 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 SPNP16150 400 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 TGFBR1P36897 503 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 HOGA1Q86XE5 327 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 CROCCP3Q8IVE0 287 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 MMD2Q8IY49 270 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 GVQW1Q8N7I0 195 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 ADAD2Q8NCV1 583 aaKnown RBP6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 OR4S2Q8NH73 311 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 VSTM2AQ8TAG5 236 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 SECTM1Q8WVN6 248 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 USMG5Q96IX5 58 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 ELOVL1Q9BW60 279 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 ZNF430Q9H8G1 570 aaPredicted RBP6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 ZFAND3Q9H8U3 227 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 VCX3AQ9NNX9 186 aa6.51□□□□□ -1.37
HMGXB4-207ENST00000498212 A0A087WXM4 84 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 AIREO43918 545 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 KBTBD11O94819 623 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 OR2A4O95047 310 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 TNFAIP8O95379 198 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 PTHLHP12272 177 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 FCGR2CP31995 323 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 CBX5P45973 191 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 LSM3P62310 102 aaKnown RBP6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 EIF4EBP1Q13541 118 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 DYRK1AQ13627 763 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 MSMO1Q15800 293 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 ZNF343Q6P1L6 599 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 ZNF66Q6ZN08 573 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 VKORC1L1Q8N0U8 176 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 MFSD4AQ8N468 514 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 TSPAN14Q8NG11 270 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 OR13F1Q8NGS4 319 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 WWC2-AS2Q96NR7 200 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 OR2A7Q96R45 310 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 SPIN2AQ99865 258 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 ASCL2Q99929 193 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 SPIN2BQ9BPZ2 258 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 RSRP1Q9BUV0 290 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 AUNIPQ9H7T9 357 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 TAS2R8Q9NYW2 309 aa6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 PEF1Q9UBV8 284 aaKnown RBP6.5□□□□□ -1.37
HMGXB4-207ENST00000498212 MEIS3P1A6NDR6 274 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 FAM223BA6NKX1 122 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 TNFSF12O43508 249 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 XRCC3O43542 346 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 HRASP01112 189 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 PPYP01298 95 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 IGLV1-51P01701 117 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 FCER2P06734 321 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 RPS19P39019 145 aaKnown RBP6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 KIR2DS2P43631 304 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 SYNJ2BPP57105 145 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 BRWD1-AS2P59051 145 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 FXYD4P59646 89 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 KLF5Q13887 457 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 RPEL1Q2QD12 228 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 UBE2NLQ5JXB2 153 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 C10orf55Q5SWW7 151 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 HAPLN4Q86UW8 402 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 SLC25A42Q86VD7 318 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 ANKRD13BQ86YJ7 626 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 FAM223AQ8IWN6 122 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 PUSL1Q8N0Z8 303 aaKnown RBP6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 TTC9CQ8N5M4 171 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 ZBTB34Q8NCN2 500 aa6.49□□□□□ -1.37
HMGXB4-207ENST00000498212 OR5AP2Q8NGF4 316 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms