RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 KCTD9Q7L273 389 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 MRPL41Q8IXM3 137 aaKnown RBP12.02□□□□□ -0.49
NUP50-219ENST00000497960 LINC00482Q8N8I6 264 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 BORCS5Q969J3 196 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 RNF5Q99942 180 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 PARP11Q9NR21 331 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 CCL28Q9NRJ3 127 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 GAB2Q9UQC2 676 aa12.02□□□□□ -0.49
NUP50-219ENST00000497960 IGHV7-81A0A0B4J1V7 117 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 RRHO14718 337 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 ATP6V0E1O15342 81 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 TNFSF12O43508 249 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 IL7P13232 177 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 CFHR3Q02985 330 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 MSMO1Q15800 293 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 BAK1Q16611 211 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 TMEM65Q6PI78 240 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 ETV3LQ6ZN32 361 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 ZNF818PQ6ZRF7 136 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 LCNL1Q6ZST4 164 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 RNF152Q8N8N0 203 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 TCTEX1D2Q8WW35 142 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 ADTRPQ96IZ2 230 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 SDHCQ99643 169 aaPredicted RBP12.01□□□□□ -0.49
NUP50-219ENST00000497960 CCDC32Q9BV29 185 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 GPR61Q9BZJ8 451 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 FBXL15Q9H469 300 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 SLC35D1Q9NTN3 355 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 WSB1Q9Y6I7 421 aa12.01□□□□□ -0.49
NUP50-219ENST00000497960 PROP1O75360 226 aa12□□□□□ -0.49
NUP50-219ENST00000497960 S100GP29377 79 aa12□□□□□ -0.49
NUP50-219ENST00000497960 DUTP33316 252 aaKnown RBP12□□□□□ -0.49
NUP50-219ENST00000497960 CDX1P47902 265 aaPredicted RBP12□□□□□ -0.49
NUP50-219ENST00000497960 RTL8BQ17RB0 113 aa12□□□□□ -0.49
NUP50-219ENST00000497960 LPCAT3Q6P1A2 487 aa12□□□□□ -0.49
NUP50-219ENST00000497960 PDPNQ86YL7 162 aa12□□□□□ -0.49
NUP50-219ENST00000497960 SLC38A6Q8IZM9 456 aa12□□□□□ -0.49
NUP50-219ENST00000497960 ZNF383Q8NA42 475 aa12□□□□□ -0.49
NUP50-219ENST00000497960 ZBTB34Q8NCN2 500 aa12□□□□□ -0.49
NUP50-219ENST00000497960 TSNAXQ99598 290 aaKnown RBP12□□□□□ -0.49
NUP50-219ENST00000497960 HSD17B10Q99714 261 aaKnown RBP12□□□□□ -0.49
NUP50-219ENST00000497960 PRRT1Q99946 306 aa12□□□□□ -0.49
NUP50-219ENST00000497960 MCRIP2Q9BUT9 160 aaKnown RBP12□□□□□ -0.49
NUP50-219ENST00000497960 SCP2D1Q9UJQ7 156 aa12□□□□□ -0.49
NUP50-219ENST00000497960 TRAV41A0A0B4J266 112 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 LINC00473A8K010 186 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 G3V318 75 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 CCL24O00175 119 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 GPR31O00270 319 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 IGLV2-14P01704 120 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 ZNF735P0CB33 412 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 PSMB8P28062 276 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 CD40LGP29965 261 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 ECI1P42126 302 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 LINC00205P59089 165 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 RPS16P62249 146 aaKnown RBP11.99□□□□□ -0.49
NUP50-219ENST00000497960 CATR1Q13166 79 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 PHLDA2Q53GA4 152 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 OR2B11Q5JQS5 317 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 AADACL3Q5VUY0 350 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 ZNF66Q6ZN08 573 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 LHFPL1Q86WI0 220 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 CMTM1Q8IZ96 169 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 OR51S1Q8NGJ8 323 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 MRAPQ8TCY5 172 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 ABHD5Q8WTS1 349 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 DEDD2Q8WXF8 326 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 DPF1Q92782 380 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 FLYWCH2Q96CP2 140 aaKnown RBP11.99□□□□□ -0.49
NUP50-219ENST00000497960 P2RX4Q99571 388 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 HRASLSQ9HDD0 168 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 METTL1Q9UBP6 276 aaKnown RBP11.99□□□□□ -0.49
NUP50-219ENST00000497960 PRELID3BQ9Y3B1 194 aa11.99□□□□□ -0.49
NUP50-219ENST00000497960 TGP01266 2768 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 LINC00854A0A1B0GVQ3 168 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 SPDEFO95238 335 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 RLN1P04808 185 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 PPIFP30405 207 aaKnown RBP11.98□□□□□ -0.49
NUP50-219ENST00000497960 GNRHRP30968 328 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 UCP3P55916 312 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 RAB25P57735 213 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 CX3CL1P78423 397 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 TAGLNQ01995 201 aaKnown RBP11.98□□□□□ -0.49
NUP50-219ENST00000497960 IDO2Q6ZQW0 420 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 BVESQ8NE79 360 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 OR51H1Q8NH63 302 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 TERB2Q8NHR7 220 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 RAX2Q96IS3 184 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 DUX3Q96PT4 197 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 GPHA2Q96T91 129 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 RSRP1Q9BUV0 290 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 AURKAIP1Q9NWT8 199 aaPredicted RBP11.98□□□□□ -0.49
NUP50-219ENST00000497960 SLC2A8Q9NY64 477 aa11.98□□□□□ -0.49
NUP50-219ENST00000497960 IGKV1-16P04430 117 aa11.97□□□□□ -0.49
NUP50-219ENST00000497960 RRASP10301 218 aa11.97□□□□□ -0.49
NUP50-219ENST00000497960 KIR2DS2P43631 304 aa11.97□□□□□ -0.49
NUP50-219ENST00000497960 TMEM267Q0VDI3 215 aaPredicted RBP11.97□□□□□ -0.49
NUP50-219ENST00000497960 PSG5Q15238 335 aa11.97□□□□□ -0.49
NUP50-219ENST00000497960 ECSCRQ19T08 205 aa11.97□□□□□ -0.49
NUP50-219ENST00000497960 OR13C8Q8NGS7 320 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms