RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 C15orf41Q9Y2V0 281 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 COL4A1P02462 1669 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 TENM1Q9UKZ4 2725 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 NUP160Q12769 1436 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 RIMS2Q9UQ26 1411 aa1.06□□□□□ -2.24
PSPC1-205ENST00000497722 MDC1Q14676 2089 aaKnown RBP1.05□□□□□ -2.24
PSPC1-205ENST00000497722 A0A087WUU8 490 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 TMED7-TICAM2A0A0A6YYA0 188 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 A0A0J9YW62 118 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 TRBV6-5A0A0K0K1A5 114 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 H3BT86 120 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 LYNX1P0DP58 116 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 DDTP30046 118 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 RPL30P62888 115 aaKnown RBP1.05□□□□□ -2.24
PSPC1-205ENST00000497722 PLPPR5Q32ZL2 321 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 TNFAIP8L2Q6P589 184 aaPredicted RBP1.05□□□□□ -2.24
PSPC1-205ENST00000497722 FAM9CQ8IZT9 166 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 UBL4BQ8N7F7 174 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 OR7G1Q8NGA0 311 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 OR1L8Q8NGR8 309 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 C10orf105Q8TEF2 133 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 UPF3BQ9BZI7 483 aaKnown RBP1.05□□□□□ -2.24
PSPC1-205ENST00000497722 CXorf21Q9HAI6 301 aa1.05□□□□□ -2.24
PSPC1-205ENST00000497722 IGKV3D-7A0A0C4DH55 119 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 IGKV3OR2-268A0A0C4DH90 116 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 TINCRA0A1B0GVN0 87 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 A0A1B0GW54 56 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 FABP12A6NFH5 140 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 C9JCJ5 164 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 H7C2G1 150 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 PFDN6O15212 129 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 ZNF737O75373 536 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 APOEP02649 317 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 C1QCP02747 245 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 PPBPP02775 128 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 SERPINA7P05543 415 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 ZNF705DP0CH99 300 aaPredicted RBP1.04□□□□□ -2.24
PSPC1-205ENST00000497722 ZNF705BP0CI00 300 aaPredicted RBP1.04□□□□□ -2.24
PSPC1-205ENST00000497722 MSNP26038 577 aaKnown RBP1.04□□□□□ -2.24
PSPC1-205ENST00000497722 UBE2G2P60604 165 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 CXCR4P61073 352 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 RPS24P62847 133 aaKnown RBP1.04□□□□□ -2.24
PSPC1-205ENST00000497722 FAM201AQ5SY85 155 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 FAM78BQ5VT40 261 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 CST9Q5W186 159 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 OR2T27Q8NH04 317 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 ACOT12Q8WYK0 555 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 CMTM5Q96DZ9 223 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 SMIM19Q96E16 107 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 KCTD7Q96MP8 289 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 HRASLSQ9HDD0 168 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 GMEB1Q9Y692 573 aa1.04□□□□□ -2.24
PSPC1-205ENST00000497722 DSCAMO60469 2012 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 IGHV1-18A0A0C4DH31 117 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 GOLGA8KD6RF30 607 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 GOLGA8MH3BSY2 632 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 M0QX08 132 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 COX7A2LO14548 114 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 BIRC5O15392 142 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 TRGC1P0CF51 173 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 GPX2P18283 190 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 CCR7P32248 378 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 RAB13P51153 203 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 RAB14P61106 215 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 EMX1Q04741 257 aaPredicted RBP1.03□□□□□ -2.24
PSPC1-205ENST00000497722 PPP1R1AQ13522 171 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 ELOBQ15370 118 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 NNATQ16517 81 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 BATFQ16520 125 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 SAPCD1Q5SSQ6 148 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 C5orf46Q6UWT4 87 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 C7orf65Q6ZTY9 151 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 TMEM251Q8N6I4 163 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 SPACA4Q8TDM5 124 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 EEF1AKMT1Q8WVE0 214 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 ASB17Q8WXJ9 295 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 GNPNAT1Q96EK6 184 aaPredicted RBP1.03□□□□□ -2.24
PSPC1-205ENST00000497722 Q96M85 177 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 ERMAPQ96PL5 475 aaPredicted RBP1.03□□□□□ -2.24
PSPC1-205ENST00000497722 CCL13Q99616 98 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 WDR54Q9H977 334 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 GPR84Q9NQS5 396 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 DKKL1Q9UK85 242 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 POLR1DQ9Y2S0 133 aa1.03□□□□□ -2.24
PSPC1-205ENST00000497722 KLK5Q9Y337 293 aaPredicted RBP1.03□□□□□ -2.24
PSPC1-205ENST00000497722 IGKV3-7A0A075B6H7 116 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 TRAV7A0A075B6U4 112 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 C1orf232A0A0U1RR37 186 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 LINC00854A0A1B0GVQ3 168 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 TYMSP04818 313 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 IL3P08700 152 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 RPSAP08865 295 aaKnown RBP1.02□□□□□ -2.25
PSPC1-205ENST00000497722 LGALS1P09382 135 aaKnown RBP1.02□□□□□ -2.25
PSPC1-205ENST00000497722 G6PCP35575 357 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 RPL28P46779 137 aaKnown RBP1.02□□□□□ -2.25
PSPC1-205ENST00000497722 CSN1S1P47710 185 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 REG1BP48304 166 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 BLVRAP53004 296 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 AQP4P55087 323 aa1.02□□□□□ -2.25
PSPC1-205ENST00000497722 FKBP1AP62942 108 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms