RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 CASTOR1Q8WTX7 329 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 SECTM1Q8WVN6 248 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 TIMD4Q96H15 378 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 C18orf12Q96KH6 178 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 TMEM56Q96MV1 263 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 TP53RKQ96S44 253 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 PHB2Q99623 299 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF251Q9BRH9 671 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 SUCNR1Q9BXA5 334 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF436Q9C0F3 470 aaPredicted RBP4.33□□□□□ -1.72
GGPS1-208ENST00000497327 IFI27L2Q9H2X8 130 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 RAB18Q9NP72 206 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 MIOXQ9UGB7 285 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 RPUSD1Q9UJJ7 312 aaKnown RBP4.33□□□□□ -1.72
GGPS1-208ENST00000497327 TMEM56-RWDD3S4R434 201 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 COL12A1Q99715 3063 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 KIAA2026Q5HYC2 2103 aa4.33□□□□□ -1.72
GGPS1-208ENST00000497327 C3orf85A0A1B0GTC6 90 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 H0Y980 276 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 SMLR1H3BR10 107 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 GOSR2O14653 212 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 HSD17B6O14756 317 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 ADAP1O75689 374 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 B3GALNT1O75752 331 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 GAS8-AS1O95177 125 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 CDS2O95674 445 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 IGKV1-39P01597 117 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 IGKV1D-39P04432 117 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 OR5AC1P0C628 307 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 OMGP23515 440 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 UCP1P25874 307 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 HOXD3P31249 432 aaPredicted RBP4.32□□□□□ -1.72
GGPS1-208ENST00000497327 GPR6P46095 362 aaPredicted RBP4.32□□□□□ -1.72
GGPS1-208ENST00000497327 LMO4P61968 165 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 RPL30P62888 115 aaKnown RBP4.32□□□□□ -1.72
GGPS1-208ENST00000497327 PAX2Q02962 417 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 LTC4SQ16873 150 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 ABCA11PQ4W5N1 156 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 PRAMEF5Q5TYX0 476 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 SLC25A48Q6ZT89 311 aaKnown RBP4.32□□□□□ -1.72
GGPS1-208ENST00000497327 ODF3L1Q8IXM7 274 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 CMTM1Q8IZ96 169 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 SELENOHQ8IZQ5 122 aaKnown RBP4.32□□□□□ -1.72
GGPS1-208ENST00000497327 LGI3Q8N145 548 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 LINC00311Q8N616 119 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF525Q8N782 197 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 C8orf31Q8N9H6 132 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 UXS1Q8NBZ7 420 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 OR11H4Q8NGC9 324 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 OR8B3Q8NGG8 313 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 COQ8AQ8NI60 647 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 C10orf105Q8TEF2 133 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 ASB13Q8WXK3 278 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF714Q96N38 554 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 OR8B2Q96RD0 313 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 CCL19Q99731 98 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 TMEM222Q9H0R3 208 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 GAL3ST2Q9H3Q3 398 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 RAB9BQ9NP90 201 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 SDHAF2Q9NX18 166 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 GNG12Q9UBI6 72 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 RNF150Q9ULK6 438 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 PSG11Q9UQ72 335 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 KCNIP3Q9Y2W7 256 aa4.32□□□□□ -1.72
GGPS1-208ENST00000497327 HELZ2Q9BYK8 2649 aaKnown RBP4.32□□□□□ -1.72
GGPS1-208ENST00000497327 TRAV14DV4A0A0A6YYC5 116 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 MPTX1A8MV57 137 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 A8MXK9 166 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 NDUFS8O00217 210 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 CCSO14618 274 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 PHF1O43189 567 aaPredicted RBP4.31□□□□□ -1.72
GGPS1-208ENST00000497327 TNFSF12O43508 249 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 RGS11O94810 467 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 IGHV2-5P01817 119 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 RBP4P02753 201 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 P0C879 139 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 IGHV1-8P0DP01 117 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 COMPP49747 757 aaPredicted RBP4.31□□□□□ -1.72
GGPS1-208ENST00000497327 EIF2B2P49770 351 aaKnown RBP4.31□□□□□ -1.72
GGPS1-208ENST00000497327 ZFP69Q49AA0 526 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 NMSQ5H8A3 153 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 GGNBP1Q5YKI7 109 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 LAMTOR1Q6IAA8 161 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 C16orf54Q6UWD8 224 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 LYZL2Q7Z4W2 148 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 NOXA1Q86UR1 476 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.31□□□□□ -1.72
GGPS1-208ENST00000497327 H1FXQ92522 213 aaKnown RBP4.31□□□□□ -1.72
GGPS1-208ENST00000497327 NRGNQ92686 78 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 LEAP2Q969E1 77 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 IL22RA2Q969J5 263 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 ST6GALNAC6Q969X2 333 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 ABHD14BQ96IU4 210 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 SEC22AQ96IW7 307 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 OR10C1Q96KK4 312 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 BPESC1Q9GZL8 116 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 OR2D2Q9H210 308 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 FAM212BQ9NTI7 297 aaPredicted RBP4.31□□□□□ -1.72
GGPS1-208ENST00000497327 SESN1Q9Y6P5 492 aa4.31□□□□□ -1.72
GGPS1-208ENST00000497327 MED13LQ71F56 2210 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms