RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 OR13F1Q8NGS4 319 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 VSTM2AQ8TAG5 236 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 SRSF12Q8WXF0 261 aaKnown RBP12.12□□□□□ -0.47
HDAC4-213ENST00000496347 YIPF6Q96EC8 236 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 PRR25Q96S07 402 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 PHB2Q99623 299 aa12.12□□□□□ -0.47
HDAC4-213ENST00000496347 TINAGL1Q9GZM7 467 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-213ENST00000496347 XRCC3O43542 346 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 ACTL6BO94805 426 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 KIR2DS2P43631 304 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 TNXAQ16473 311 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
HDAC4-213ENST00000496347 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 OR6Q1Q8NGQ2 317 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 TCTEX1D2Q8WW35 142 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 ACOT12Q8WYK0 555 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 USMG5Q96IX5 58 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 SPIN2AQ99865 258 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 SPIN2BQ9BPZ2 258 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 DCUN1D5Q9BTE7 237 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 ZNF430Q9H8G1 570 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-213ENST00000496347 RANGRFQ9HD47 186 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-213ENST00000496347 COA4Q9NYJ1 87 aa12.11□□□□□ -0.47
HDAC4-213ENST00000496347 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
HDAC4-213ENST00000496347 J3QRK9 145 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 MPPED1O15442 326 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 KBTBD11O94819 623 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 PPYP01298 95 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 OR9G9P0C7N8 305 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 FCGR2CP31995 323 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 RPL30P62888 115 aaKnown RBP12.1□□□□□ -0.47
HDAC4-213ENST00000496347 OR2B11Q5JQS5 317 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 VAX1Q5SQQ9 334 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 GVQW1Q8N7I0 195 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 SNAPC3Q92966 411 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 KCTD12Q96CX2 325 aaKnown RBP12.1□□□□□ -0.47
HDAC4-213ENST00000496347 S100A16Q96FQ6 103 aaKnown RBP12.1□□□□□ -0.47
HDAC4-213ENST00000496347 TAS2R8Q9NYW2 309 aa12.1□□□□□ -0.47
HDAC4-213ENST00000496347 MSGN1A6NI15 193 aa12.09□□□□□ -0.47
HDAC4-213ENST00000496347 FAM223BA6NKX1 122 aa12.09□□□□□ -0.47
HDAC4-213ENST00000496347 TRIM64CA6NLI5 447 aa12.09□□□□□ -0.47
HDAC4-213ENST00000496347 TGFBR1P36897 503 aa12.09□□□□□ -0.47
HDAC4-213ENST00000496347 TMEM69Q5SWH9 247 aa12.09□□□□□ -0.47
HDAC4-213ENST00000496347 FAM223AQ8IWN6 122 aa12.09□□□□□ -0.47
HDAC4-213ENST00000496347 ZBTB34Q8NCN2 500 aa12.09□□□□□ -0.47
HDAC4-213ENST00000496347 SLC25A46Q96AG3 418 aa12.09□□□□□ -0.47
HDAC4-213ENST00000496347 IFT46Q9NQC8 304 aa12.09□□□□□ -0.47
HDAC4-213ENST00000496347 RBFOX2O43251 390 aaKnown RBP eCLIP12.08□□□□□ -0.485e-6■■□□□ 12
HDAC4-213ENST00000496347 OR2A4O95047 310 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 LY86O95711 162 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 NHLRC4P0CG21 123 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-213ENST00000496347 RPS19P39019 145 aaKnown RBP12.08□□□□□ -0.48
HDAC4-213ENST00000496347 CATR1Q13166 79 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 DYRK1AQ13627 763 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 C11orf87Q6NUJ2 197 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 ZNF343Q6P1L6 599 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 SAMD12Q8N8I0 201 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 OR5AP2Q8NGF4 316 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 SECTM1Q8WVN6 248 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 BORCS5Q969J3 196 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 OR2A7Q96R45 310 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 ELOVL1Q9BW60 279 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 ANAPC10Q9UM13 185 aa12.08□□□□□ -0.48
HDAC4-213ENST00000496347 HRASP01112 189 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 APELAP0DMC3 54 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 MAS1LP35410 378 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 TAS2R46P59540 309 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 FAM209BQ5JX69 171 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 SLC25A42Q86VD7 318 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 PUSL1Q8N0Z8 303 aaKnown RBP12.07□□□□□ -0.48
HDAC4-213ENST00000496347 MFSD4AQ8N468 514 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 TMEM167AQ8TBQ9 72 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 OR4C12Q96R67 309 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 AIFM2Q9BRQ8 373 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 ZNF257Q9Y2Q1 563 aa12.07□□□□□ -0.48
HDAC4-213ENST00000496347 PTHLHP12272 177 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 TAS2R20P59543 309 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 HERV-K104P61576 105 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 LSM3P62310 102 aaKnown RBP12.06□□□□□ -0.48
HDAC4-213ENST00000496347 RHOGP84095 191 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 C10orf55Q5SWW7 151 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 VKORC1L1Q8N0U8 176 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 NECAP1Q8NC96 275 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 OR4A5Q8NH83 315 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 GIMAP1Q8WWP7 306 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 SLC5A7Q9GZV3 580 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 CCL28Q9NRJ3 127 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 PEF1Q9UBV8 284 aaKnown RBP12.06□□□□□ -0.48
HDAC4-213ENST00000496347 SMAD5-AS1Q9Y6J3 95 aa12.06□□□□□ -0.48
HDAC4-213ENST00000496347 TRBV9A0A0B4J1U6 114 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 ANKRD34BA5PLL1 514 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 NPIPB5A8MRT5 1133 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 FGF2P09038 288 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 GP9P14770 177 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 SPNP16150 400 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 BRWD1-AS2P59051 145 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 FXYD4P59646 89 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 DEFA5Q01523 94 aa12.05□□□□□ -0.48
HDAC4-213ENST00000496347 EXOSC2Q13868 293 aaKnown RBP12.05□□□□□ -0.48
HDAC4-213ENST00000496347 KLF5Q13887 457 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms