RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 VSTM2AQ8TAG5 236 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 PRR25Q96S07 402 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 PHB2Q99623 299 aa18.66■□□□□ 0.58
HLA-C-209ENST00000495835 MSGN1A6NI15 193 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 J3QRK9 145 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 ACTL6BO94805 426 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 EIF4EBP1Q13541 118 aaPredicted RBP18.65■□□□□ 0.58
HLA-C-209ENST00000495835 TNXAQ16473 311 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 ZBTB34Q8NCN2 500 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 OR6Q1Q8NGQ2 317 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 OR4S2Q8NH73 311 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 SRSF12Q8WXF0 261 aaKnown RBP18.65■□□□□ 0.58
HLA-C-209ENST00000495835 S100A16Q96FQ6 103 aaKnown RBP18.65■□□□□ 0.58
HLA-C-209ENST00000495835 SPIN2AQ99865 258 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 SPIN2BQ9BPZ2 258 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 DCUN1D5Q9BTE7 237 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 ELOVL1Q9BW60 279 aa18.65■□□□□ 0.58
HLA-C-209ENST00000495835 XRCC3O43542 346 aa18.64■□□□□ 0.57
HLA-C-209ENST00000495835 SAA1P0DJI8 122 aaPredicted RBP18.64■□□□□ 0.57
HLA-C-209ENST00000495835 RPL30P62888 115 aaKnown RBP18.64■□□□□ 0.57
HLA-C-209ENST00000495835 MFSD4AQ8N468 514 aa18.64■□□□□ 0.57
HLA-C-209ENST00000495835 YIPF6Q96EC8 236 aa18.64■□□□□ 0.57
HLA-C-209ENST00000495835 OR4C12Q96R67 309 aa18.64■□□□□ 0.57
HLA-C-209ENST00000495835 OR9G9P0C7N8 305 aa18.63■□□□□ 0.57
HLA-C-209ENST00000495835 KIR2DS2P43631 304 aa18.63■□□□□ 0.57
HLA-C-209ENST00000495835 ZNF343Q6P1L6 599 aa18.63■□□□□ 0.57
HLA-C-209ENST00000495835 GVQW1Q8N7I0 195 aa18.63■□□□□ 0.57
HLA-C-209ENST00000495835 ACOT12Q8WYK0 555 aa18.63■□□□□ 0.57
HLA-C-209ENST00000495835 AIFM2Q9BRQ8 373 aa18.63■□□□□ 0.57
HLA-C-209ENST00000495835 ZNF430Q9H8G1 570 aaPredicted RBP18.63■□□□□ 0.57
HLA-C-209ENST00000495835 COA4Q9NYJ1 87 aa18.63■□□□□ 0.57
HLA-C-209ENST00000495835 FCGR2CP31995 323 aa18.62■□□□□ 0.57
HLA-C-209ENST00000495835 RPS19P39019 145 aaKnown RBP18.62■□□□□ 0.57
HLA-C-209ENST00000495835 IDO2Q6ZQW0 420 aa18.62■□□□□ 0.57
HLA-C-209ENST00000495835 ADAD2Q8NCV1 583 aaKnown RBP18.62■□□□□ 0.57
HLA-C-209ENST00000495835 OR5AP2Q8NGF4 316 aa18.62■□□□□ 0.57
HLA-C-209ENST00000495835 TCTEX1D2Q8WW35 142 aa18.62■□□□□ 0.57
HLA-C-209ENST00000495835 GIMAP1Q8WWP7 306 aa18.62■□□□□ 0.57
HLA-C-209ENST00000495835 HRASP01112 189 aa18.61■□□□□ 0.57
HLA-C-209ENST00000495835 PPYP01298 95 aa18.61■□□□□ 0.57
HLA-C-209ENST00000495835 MAS1LP35410 378 aa18.61■□□□□ 0.57
HLA-C-209ENST00000495835 UBE2NLQ5JXB2 153 aa18.61■□□□□ 0.57
HLA-C-209ENST00000495835 SLC25A42Q86VD7 318 aa18.61■□□□□ 0.57
HLA-C-209ENST00000495835 TTC9CQ8N5M4 171 aa18.61■□□□□ 0.57
HLA-C-209ENST00000495835 KCTD12Q96CX2 325 aaKnown RBP18.61■□□□□ 0.57
HLA-C-209ENST00000495835 PEF1Q9UBV8 284 aaKnown RBP18.61■□□□□ 0.57
HLA-C-209ENST00000495835 SMAD5-AS1Q9Y6J3 95 aa18.61■□□□□ 0.57
HLA-C-209ENST00000495835 FAM223BA6NKX1 122 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 TRIM64CA6NLI5 447 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 MPPED1O15442 326 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 OR2A4O95047 310 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 LY86O95711 162 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 KLF5Q13887 457 aaPredicted RBP18.6■□□□□ 0.57
HLA-C-209ENST00000495835 FAM209BQ5JX69 171 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 FAM223AQ8IWN6 122 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 PUSL1Q8N0Z8 303 aaKnown RBP18.6■□□□□ 0.57
HLA-C-209ENST00000495835 OR13F1Q8NGS4 319 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 TMEM167AQ8TBQ9 72 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 BORCS5Q969J3 196 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 OR2A7Q96R45 310 aa18.6■□□□□ 0.57
HLA-C-209ENST00000495835 RBFOX2O43251 390 aaKnown RBP eCLIP18.59■□□□□ 0.57
HLA-C-209ENST00000495835 DYRK1AQ13627 763 aa18.59■□□□□ 0.57
HLA-C-209ENST00000495835 TATDN3Q17R31 274 aa18.59■□□□□ 0.57
HLA-C-209ENST00000495835 C11orf87Q6NUJ2 197 aa18.59■□□□□ 0.57
HLA-C-209ENST00000495835 SECTM1Q8WVN6 248 aa18.59■□□□□ 0.57
HLA-C-209ENST00000495835 TAS2R8Q9NYW2 309 aa18.59■□□□□ 0.57
HLA-C-209ENST00000495835 TRBV9A0A0B4J1U6 114 aa18.58■□□□□ 0.56
HLA-C-209ENST00000495835 KBTBD11O94819 623 aa18.58■□□□□ 0.56
HLA-C-209ENST00000495835 BRWD1-AS2P59051 145 aa18.58■□□□□ 0.56
HLA-C-209ENST00000495835 OR2B11Q5JQS5 317 aa18.58■□□□□ 0.56
HLA-C-209ENST00000495835 SNAPC3Q92966 411 aa18.58■□□□□ 0.56
HLA-C-209ENST00000495835 SLC25A46Q96AG3 418 aa18.58■□□□□ 0.56
HLA-C-209ENST00000495835 CCL28Q9NRJ3 127 aa18.58■□□□□ 0.56
HLA-C-209ENST00000495835 ANKRD34BA5PLL1 514 aa18.57■□□□□ 0.56
HLA-C-209ENST00000495835 GP9P14770 177 aa18.57■□□□□ 0.56
HLA-C-209ENST00000495835 SPNP16150 400 aa18.57■□□□□ 0.56
HLA-C-209ENST00000495835 TGFBR1P36897 503 aa18.57■□□□□ 0.56
HLA-C-209ENST00000495835 CATR1Q13166 79 aa18.57■□□□□ 0.56
HLA-C-209ENST00000495835 SAMD12Q8N8I0 201 aa18.57■□□□□ 0.56
HLA-C-209ENST00000495835 CMTM3Q96MX0 182 aa18.57■□□□□ 0.56
HLA-C-209ENST00000495835 IFT46Q9NQC8 304 aa18.57■□□□□ 0.56
HLA-C-209ENST00000495835 ANAPC10Q9UM13 185 aa18.57■□□□□ 0.56
HLA-C-209ENST00000495835 IGLV1-51P01701 117 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 APELAP0DMC3 54 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 TMEM69Q5SWH9 247 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 DHRS11Q6UWP2 260 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 NECAP1Q8NC96 275 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 OR4A5Q8NH83 315 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 CD300LFQ8TDQ1 290 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 WWC2-AS2Q96NR7 200 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 SLC5A7Q9GZV3 580 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 BET1LQ9NYM9 111 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 SIGLEC8Q9NYZ4 499 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 ZNF257Q9Y2Q1 563 aa18.56■□□□□ 0.56
HLA-C-209ENST00000495835 PTHLHP12272 177 aa18.55■□□□□ 0.56
HLA-C-209ENST00000495835 NAT1P18440 290 aa18.55■□□□□ 0.56
HLA-C-209ENST00000495835 LSM3P62310 102 aaKnown RBP18.55■□□□□ 0.56
HLA-C-209ENST00000495835 RHOGP84095 191 aa18.55■□□□□ 0.56
HLA-C-209ENST00000495835 ANKRD13BQ86YJ7 626 aa18.55■□□□□ 0.56
HLA-C-209ENST00000495835 VKORC1L1Q8N0U8 176 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms