RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ATP5SQ99766 215 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 AIFM2Q9BRQ8 373 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 SMIM3Q9BZL3 60 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 MAGT1Q9H0U3 335 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 JMJD1CQ15652 2540 aa13.36□□□□□ -0.27
CBX4-204ENST00000495122 LINC00473A8K010 186 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 M0R1X1 148 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 RAMP3O60896 148 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 SELLP14151 372 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 NDUFB7P17568 137 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 F2RL1P55085 397 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 UBE2KP61086 200 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 ERVK-16P61578 105 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 RPL31P62899 125 aaKnown RBP13.35□□□□□ -0.27
CBX4-204ENST00000495122 DHRS7BQ6IAN0 325 aaPredicted RBP13.35□□□□□ -0.27
CBX4-204ENST00000495122 SLC25A48Q6ZT89 311 aaKnown RBP13.35□□□□□ -0.27
CBX4-204ENST00000495122 R3HDM4Q96D70 268 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 ZNF714Q96N38 554 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 S1PR3Q99500 378 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 WFDC1Q9HC57 220 aa13.35□□□□□ -0.27
CBX4-204ENST00000495122 MARCH11A6NNE9 402 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 TMEM50AO95807 157 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 IGHV4-39P01824 125 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 OR8U8P0C7N1 319 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 NQO2P16083 231 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 BRWD1-AS2P59051 145 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 ZNF816Q0VGE8 651 aaPredicted RBP13.34□□□□□ -0.27
CBX4-204ENST00000495122 ATP6V1FQ16864 119 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 PDLIM3Q53GG5 364 aaPredicted RBP13.34□□□□□ -0.27
CBX4-204ENST00000495122 CT45A1Q5HYN5 189 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 BTNL3Q6UXE8 466 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 DPPA3Q6W0C5 159 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 LINC00311Q8N616 119 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 OR5C1Q8NGR4 320 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 OR52E5Q8NH55 327 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 CT45A3Q8NHU0 189 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 LYPD6BQ8NI32 183 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 ZNF596Q8TC21 504 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 DDB2Q92466 427 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 TSNAXQ99598 290 aaKnown RBP13.34□□□□□ -0.27
CBX4-204ENST00000495122 RAB1BQ9H0U4 201 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 CBLN4Q9NTU7 201 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 PSENENQ9NZ42 101 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 NUP50Q9UKX7 468 aa13.34□□□□□ -0.27
CBX4-204ENST00000495122 MALRD1Q5VYJ5 2156 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 INAFM1C9JVW0 142 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 KRASP01116 189 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 IFNA5P01569 189 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 G6PCP35575 357 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 DYNLT3P51808 116 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 PJVKQ0ZLH3 352 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 POU2AF1Q16633 256 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 LTC4SQ16873 150 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 NCR3LG1Q68D85 454 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 C11orf71Q6IPW1 123 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 NEU4Q8WWR8 484 aaPredicted RBP13.33□□□□□ -0.28
CBX4-204ENST00000495122 DCAF16Q9NXF7 216 aa13.33□□□□□ -0.28
CBX4-204ENST00000495122 A0A087X0M5 115 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 A0A1B0GX30 115 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 A0A1W2PPH5 198 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 RNF223E7ERA6 249 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 NDUFS7O75251 213 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 PROP1O75360 226 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 RBP4P02753 201 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 ZNF134P52741 427 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 RPP30P78346 268 aaKnown RBP13.32□□□□□ -0.28
CBX4-204ENST00000495122 PXDC1Q5TGL8 231 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 DUX4L9Q6RFH8 374 aaPredicted RBP13.32□□□□□ -0.28
CBX4-204ENST00000495122 BTNL8Q6UX41 500 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 TMEM14EPQ6UXP3 125 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 PRIMA1Q86XR5 153 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 ODF3L1Q8IXM7 274 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 PUSL1Q8N0Z8 303 aaKnown RBP13.32□□□□□ -0.28
CBX4-204ENST00000495122 LFNGQ8NES3 379 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 BSCL2Q96G97 398 aaPredicted RBP13.32□□□□□ -0.28
CBX4-204ENST00000495122 HIPK2Q9H2X6 1198 aa13.32□□□□□ -0.28
CBX4-204ENST00000495122 SAA2-SAA4A0A096LPE2 208 aa13.31□□□□□ -0.28
CBX4-204ENST00000495122 FCGR3BO75015 233 aa13.31□□□□□ -0.28
CBX4-204ENST00000495122 FBXO24O75426 580 aa13.31□□□□□ -0.28
CBX4-204ENST00000495122 HRASP01112 189 aa13.31□□□□□ -0.28
CBX4-204ENST00000495122 SAA2P0DJI9 122 aaPredicted RBP13.31□□□□□ -0.28
CBX4-204ENST00000495122 FAM53AQ6NSI3 398 aaPredicted RBP13.31□□□□□ -0.28
CBX4-204ENST00000495122 ZNF429Q86V71 674 aa13.31□□□□□ -0.28
CBX4-204ENST00000495122 ZCCHC24Q8N2G6 241 aaKnown RBP13.31□□□□□ -0.28
CBX4-204ENST00000495122 MAPK1IP1LQ8NDC0 245 aa13.31□□□□□ -0.28
CBX4-204ENST00000495122 CLCC1Q96S66 551 aa13.31□□□□□ -0.28
CBX4-204ENST00000495122 ZNF251Q9BRH9 671 aa13.31□□□□□ -0.28
CBX4-204ENST00000495122 PSMG3Q9BT73 122 aaPredicted RBP13.31□□□□□ -0.28
CBX4-204ENST00000495122 RBKSQ9H477 322 aa13.31□□□□□ -0.28
CBX4-204ENST00000495122 BTBD17A6NE02 478 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 DVL1O14640 695 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 OMGP23515 440 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 NFYBP25208 207 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 SPCS3P61009 180 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 CLINT1Q14677 625 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 RTL8BQ17RB0 113 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 TMEM155Q4W5P6 130 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 RPL39P5Q59GN2 51 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 OR2B11Q5JQS5 317 aa13.3□□□□□ -0.28
CBX4-204ENST00000495122 PRAMEF5Q5TYX0 476 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms