RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PJVKQ0ZLH3 352 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 CATR1Q13166 79 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 FHL3Q13643 280 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 KIAA0141Q14154 515 aaPredicted RBP13.72□□□□□ -0.21
HDAC4-211ENST00000494800 TNXAQ16473 311 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 CTF1Q16619 201 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 PRSS8Q16651 343 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 OR5H2Q8NGV7 314 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 MS4A10Q96PG2 267 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 SCPEP1Q9HB40 452 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 CCL28Q9NRJ3 127 aa13.72□□□□□ -0.21
HDAC4-211ENST00000494800 FAM25AB3EWG3 89 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 FAM25CB3EWG5 89 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 FAM25GB3EWG6 89 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 MPPED1O15442 326 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 HRASP01112 189 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 TRGV3P03979 118 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 LGALS1P09382 135 aaKnown RBP13.71□□□□□ -0.21
HDAC4-211ENST00000494800 ZNF182P17025 639 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-211ENST00000494800 RPL30P62888 115 aaKnown RBP13.71□□□□□ -0.21
HDAC4-211ENST00000494800 IDO2Q6ZQW0 420 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 TMEM17Q86X19 198 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 MMD2Q8IY49 270 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 POC5Q8NA72 575 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 CASTOR1Q8WTX7 329 aa13.71□□□□□ -0.21
HDAC4-211ENST00000494800 NAA50Q9GZZ1 169 aaKnown RBP13.71□□□□□ -0.21
HDAC4-211ENST00000494800 A0A0G2JLM5 398 aa13.7□□□□□ -0.22
HDAC4-211ENST00000494800 TNFSF12O43508 249 aa13.7□□□□□ -0.22
HDAC4-211ENST00000494800 HPGDSO60760 199 aa13.7□□□□□ -0.22
HDAC4-211ENST00000494800 SAA1P0DJI8 122 aaPredicted RBP13.7□□□□□ -0.22
HDAC4-211ENST00000494800 DYRK1AQ13627 763 aa13.7□□□□□ -0.22
HDAC4-211ENST00000494800 C9orf66Q5T8R8 295 aa13.7□□□□□ -0.22
HDAC4-211ENST00000494800 OR5T1Q8NG75 326 aa13.7□□□□□ -0.22
HDAC4-211ENST00000494800 SPIN2AQ99865 258 aa13.7□□□□□ -0.22
HDAC4-211ENST00000494800 SPIN2BQ9BPZ2 258 aa13.7□□□□□ -0.22
HDAC4-211ENST00000494800 ANAPC10Q9UM13 185 aa13.7□□□□□ -0.22
HDAC4-211ENST00000494800 C13orf42A0A1B0GVH6 325 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 MSGN1A6NI15 193 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 LINC01619G3V211 115 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 OR2A4O95047 310 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 PMP2P02689 132 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 NAT1P18440 290 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 ELK1P19419 428 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 HOXD3P31249 432 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-211ENST00000494800 RFX2P48378 723 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 ALDH3B2P48448 385 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 EGFEM1PQ0D2K5 195 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 EIF4EBP1Q13541 118 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-211ENST00000494800 DHRS11Q6UWP2 260 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 OR6F1Q8NGZ6 308 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 C15orf40Q8WUR7 153 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 SRSF12Q8WXF0 261 aaKnown RBP13.69□□□□□ -0.22
HDAC4-211ENST00000494800 OR2A7Q96R45 310 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 ZNF2Q9BSG1 426 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-211ENST00000494800 ZNF430Q9H8G1 570 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-211ENST00000494800 COA4Q9NYJ1 87 aa13.69□□□□□ -0.22
HDAC4-211ENST00000494800 SEC14L6B5MCN3 397 aa13.68□□□□□ -0.22
HDAC4-211ENST00000494800 SULT1C2O00338 296 aa13.68□□□□□ -0.22
HDAC4-211ENST00000494800 NOL3O60936 208 aaKnown RBP13.68□□□□□ -0.22
HDAC4-211ENST00000494800 RCVRNP35243 200 aa13.68□□□□□ -0.22
HDAC4-211ENST00000494800 TSPAN5P62079 268 aa13.68□□□□□ -0.22
HDAC4-211ENST00000494800 SSBP2P81877 361 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-211ENST00000494800 CMTM1Q8IZ96 169 aa13.68□□□□□ -0.22
HDAC4-211ENST00000494800 SPAG16Q8N0X2 631 aa13.68□□□□□ -0.22
HDAC4-211ENST00000494800 CD300LFQ8TDQ1 290 aa13.68□□□□□ -0.22
HDAC4-211ENST00000494800 GPX8Q8TED1 209 aa13.68□□□□□ -0.22
HDAC4-211ENST00000494800 ADAM30Q9UKF2 790 aa13.68□□□□□ -0.22
HDAC4-211ENST00000494800 NOTCH3Q9UM47 2321 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 RBFOX2O43251 390 aaKnown RBP eCLIP13.67□□□□□ -0.223e-8■■■■□ 23.1
HDAC4-211ENST00000494800 RAMP3O60896 148 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 KBTBD11O94819 623 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 BRI3O95415 125 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 IGHV3-11P01762 117 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 HLA-DMAP28067 261 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 S100GP29377 79 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 HRH1P35367 487 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 MAS1LP35410 378 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 INSL3P51460 131 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 DGCR2P98153 550 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 DCTN2Q13561 401 aaKnown RBP13.67□□□□□ -0.22
HDAC4-211ENST00000494800 AADACL3Q5VUY0 350 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 ZNF818PQ6ZRF7 136 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 VKORC1L1Q8N0U8 176 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 RAB2BQ8WUD1 216 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 MOB3AQ96BX8 217 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 RHOVQ96L33 236 aa13.67□□□□□ -0.22
HDAC4-211ENST00000494800 ALX4Q9H161 411 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-211ENST00000494800 HPRT1P00492 218 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 HSPB1P04792 205 aaKnown RBP13.66□□□□□ -0.22
HDAC4-211ENST00000494800 OR9G9P0C7N8 305 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 KRTAP10-11P60412 298 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 LPCAT3Q6P1A2 487 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 SLC25A42Q86VD7 318 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 CLVS1Q8IUQ0 354 aaPredicted RBP13.66□□□□□ -0.22
HDAC4-211ENST00000494800 OR4A5Q8NH83 315 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 USMG5Q96IX5 58 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 GPHA2Q96T91 129 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 BCL7BQ9BQE9 202 aa13.66□□□□□ -0.22
HDAC4-211ENST00000494800 TINAGL1Q9GZM7 467 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms