RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 PAX6P26367 422 aa8.52□□□□□ -1.04
SAMM50-206ENST00000494795 DVL1P1P54792 670 aaPredicted RBP8.52□□□□□ -1.04
SAMM50-206ENST00000494795 PAX5Q02548 391 aa8.52□□□□□ -1.04
SAMM50-206ENST00000494795 CATR1Q13166 79 aa8.52□□□□□ -1.04
SAMM50-206ENST00000494795 H1FXQ92522 213 aaKnown RBP8.52□□□□□ -1.04
SAMM50-206ENST00000494795 ISOC2Q96AB3 205 aa8.52□□□□□ -1.04
SAMM50-206ENST00000494795 VKORC1Q9BQB6 163 aa8.52□□□□□ -1.04
SAMM50-206ENST00000494795 SLC25A10Q9UBX3 287 aaPredicted RBP8.52□□□□□ -1.04
SAMM50-206ENST00000494795 CARHSP1Q9Y2V2 147 aaKnown RBP8.52□□□□□ -1.04
SAMM50-206ENST00000494795 CEBPZOSA8MTT3 80 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 TMEM178BH3BS89 294 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 RRHO14718 337 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 TAS2R30P59541 319 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 BAXQ07812 192 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 SLC38A11Q08AI6 406 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 TM4SF20Q53R12 229 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 NCMAPQ5T1S8 102 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 TMEM200BQ69YZ2 307 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 SP5Q6BEB4 398 aaPredicted RBP8.52□□□□□ -1.05
SAMM50-206ENST00000494795 TMEM14EPQ6UXP3 125 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 ZNF439Q8NDP4 499 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 DDB2Q92466 427 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 SEC11CQ9BY50 192 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 TMPRSS5Q9H3S3 457 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 NAV3Q8IVL0 2385 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 TRGV10A0A0A0MS01 117 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 RPL35P42766 123 aaKnown RBP8.52□□□□□ -1.05
SAMM50-206ENST00000494795 RAB2AP61019 212 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 TEX36Q5VZQ5 186 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 ACSM6Q6P461 480 aa8.52□□□□□ -1.05
SAMM50-206ENST00000494795 HSD17B10Q99714 261 aaKnown RBP8.52□□□□□ -1.05
SAMM50-206ENST00000494795 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.52□□□□□ -1.05
SAMM50-206ENST00000494795 C15orf62A8K5M9 175 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 RNF212BA8MTL3 300 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 IFNA17P01571 189 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 H2AFB1P0C5Y9 115 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 RPL31P62899 125 aaKnown RBP8.51□□□□□ -1.05
SAMM50-206ENST00000494795 LINC00518Q8N0U6 118 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 SVBPQ8N300 66 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 ZBTB34Q8NCN2 500 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 GATAD1Q8WUU5 269 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 EDARADDQ8WWZ3 215 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 SAV1Q9H4B6 383 aaPredicted RBP8.51□□□□□ -1.05
SAMM50-206ENST00000494795 TMEM106BQ9NUM4 274 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 OR6C3Q9NZP0 311 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 ABCA1O95477 2261 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 IRF2P14316 349 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 MMP9P14780 707 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 TNFSF4P23510 183 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 ZNF66Q6ZN08 573 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 MOB3BQ86TA1 216 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 RXFP4Q8TDU9 374 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 WDR61Q9GZS3 305 aaKnown RBP8.51□□□□□ -1.05
SAMM50-206ENST00000494795 DYNLRB1Q9NP97 96 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 TMEM140Q9NV12 185 aa8.51□□□□□ -1.05
SAMM50-206ENST00000494795 CISD1Q9NZ45 108 aaKnown RBP8.51□□□□□ -1.05
SAMM50-206ENST00000494795 PRSS47A8MTI9 375 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 DVL1O14640 695 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 CT45A6P0DMU7 189 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 CT45A5P0DMU8 189 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 CT45A7P0DMV0 189 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 CA7P43166 264 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 MRPS11P82912 194 aaKnown RBP8.5□□□□□ -1.05
SAMM50-206ENST00000494795 RELBQ01201 579 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 LRRC75BQ2VPJ9 315 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 AVPI1Q5T686 147 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 RPP25LQ8N5L8 163 aaKnown RBP8.5□□□□□ -1.05
SAMM50-206ENST00000494795 PPP1R35Q8TAP8 253 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 RITA1Q96K30 269 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 IGSF10Q6WRI0 2623 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 PPIAL4EA0A075B759 164 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 A0A1W2PPR1 153 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 E7EUB6 86 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 PPIAL4DF5H284 164 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 RAB29O14966 203 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 SNRNP70P08621 437 aaKnown RBP8.5□□□□□ -1.05
SAMM50-206ENST00000494795 PPIAL4FP0DN26 164 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 AKR1C8PQ5T2L2 129 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 CLRN3Q8NCR9 226 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 IDI2-AS1Q9NZ38 188 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 PPIAL4AQ9Y536 164 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 SOX15O60248 233 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 ARG1P05089 322 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 UQCRFS1P47985 274 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 CD300LFQ8TDQ1 290 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 CLCC1Q96S66 551 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 S1PR3Q99500 378 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
SAMM50-206ENST00000494795 ACACBO00763 2458 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 CACNA1AO00555 2505 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 ZFP92A6NM28 416 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 PPIHO43447 177 aaKnown RBP8.49□□□□□ -1.05
SAMM50-206ENST00000494795 IFNA5P01569 189 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 TNFRSF1AP19438 455 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 ICAM4Q14773 271 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 ZNF124Q15973 351 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 MLANAQ16655 118 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 AWAT1Q58HT5 328 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 Q8N7P7 452 aa8.49□□□□□ -1.05
SAMM50-206ENST00000494795 TAF15Q92804 592 aaKnown RBP eCLIP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms