RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 QTRT1Q9BXR0 403 aaKnown RBP12.79□□□□□ -0.36
SDF4-207ENST00000494748 IL36BQ9NZH7 164 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 COL6A3P12111 3177 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 SLC17A3O00476 420 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 KITLGP21583 273 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 HOXA4Q00056 320 aaPredicted RBP12.79□□□□□ -0.36
SDF4-207ENST00000494748 Q0VG73 95 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 ZNF766Q5HY98 468 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 VN1R17PQ8TDU5 208 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 MGST2Q99735 147 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 RYDENQ9NUL5 291 aaKnown RBP12.79□□□□□ -0.36
SDF4-207ENST00000494748 SRYQ05066 204 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 TMEM183BQ1AE95 376 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 Q6ZR03 302 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 TRAV9-1A0A075B6T8 112 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 OR9G9P0C7N8 305 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 CRISP2P16562 243 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 FOLR3P41439 243 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 IFI44Q8TCB0 444 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 LRFN3Q9BTN0 628 aa12.78□□□□□ -0.36
SDF4-207ENST00000494748 DNAJC13O75165 2243 aa12.77□□□□□ -0.36
SDF4-207ENST00000494748 OPRK1P41145 380 aa12.77□□□□□ -0.36
SDF4-207ENST00000494748 ZXDAP98168 799 aa12.77□□□□□ -0.36
SDF4-207ENST00000494748 HES4Q9HCC6 221 aa12.77□□□□□ -0.36
SDF4-207ENST00000494748 NBEAQ8NFP9 2946 aa12.77□□□□□ -0.37
SDF4-207ENST00000494748 TFPI2P48307 235 aa12.77□□□□□ -0.37
SDF4-207ENST00000494748 H2BFWTQ7Z2G1 175 aa12.77□□□□□ -0.37
SDF4-207ENST00000494748 VAMP8Q9BV40 100 aa12.77□□□□□ -0.37
SDF4-207ENST00000494748 GGTLC1Q9BX51 225 aa12.77□□□□□ -0.37
SDF4-207ENST00000494748 HBZP02008 142 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
SDF4-207ENST00000494748 Q8IYB0 196 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 OR5AU1Q8NGC0 362 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 TXNDC17Q9BRA2 123 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 ZNF703Q9H7S9 590 aaPredicted RBP12.76□□□□□ -0.37
SDF4-207ENST00000494748 CDIPTO14735 213 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 ALKBH6Q3KRA9 238 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 Q8TCH9 128 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 GALMQ96C23 342 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 COQ2Q96H96 371 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 SPINK14Q6IE38 97 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 C11orf52Q96A22 123 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 RTL8AQ9BWD3 113 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 V9GYV3 84 aa12.76□□□□□ -0.37
SDF4-207ENST00000494748 IGHV3-64DA0A0J9YX35 117 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 NTN3O00634 580 aaPredicted RBP12.75□□□□□ -0.37
SDF4-207ENST00000494748 AQP7O14520 342 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 SH2D1BO14796 132 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 PROP1O75360 226 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 NDUFB8O95169 186 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 HAND1O96004 215 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 CATR1Q13166 79 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 GPX1P07203 203 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 TMPRSS3P57727 454 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 ZNF90Q03938 601 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 DMRTA1Q5VZB9 504 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 MIC13Q5XKP0 118 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 SFXN3Q9BWM7 321 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 MS4A5Q9H3V2 200 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 GNB4Q9HAV0 340 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 KCNIP1Q9NZI2 227 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 CXorf1O96002 111 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 IGHEP01854 428 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 TFF1P04155 84 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 FBXW9Q5XUX1 488 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 MCEMP1Q8IX19 187 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 ST6GALNAC3Q8NDV1 305 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 APH1AQ96BI3 265 aa12.75□□□□□ -0.37
SDF4-207ENST00000494748 TMEM30CPA0ZSE6 113 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 NXPH2O95156 264 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 RAC2P15153 192 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 VDAC2P45880 294 aaPredicted RBP12.74□□□□□ -0.37
SDF4-207ENST00000494748 RPL31P62899 125 aaKnown RBP12.74□□□□□ -0.37
SDF4-207ENST00000494748 SPATA31B1PQ5VZV4 182 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 GMPPAQ96IJ6 420 aaPredicted RBP12.74□□□□□ -0.37
SDF4-207ENST00000494748 LSM4Q9Y4Z0 139 aaKnown RBP12.74□□□□□ -0.37
SDF4-207ENST00000494748 PPIAL4AQ9Y536 164 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 MPDU1O75352 247 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 PLP2Q04941 152 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 AESQ08117 197 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 TAAR6Q96RI8 345 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 PHF7Q9BWX1 381 aaPredicted RBP12.74□□□□□ -0.37
SDF4-207ENST00000494748 ZFP30Q9Y2G7 519 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 POLDIP2Q9Y2S7 368 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 C9JCJ5 164 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 IER3P46695 156 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 CYB561P49447 251 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 OR5I1Q13606 314 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 SLC35E4Q6ICL7 350 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 MDP1Q86V88 176 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 WDR31Q8NA23 367 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 RCHY1Q96PM5 261 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 HES7Q9BYE0 225 aa12.74□□□□□ -0.37
SDF4-207ENST00000494748 OOEPA6NGQ2 149 aa12.73□□□□□ -0.37
SDF4-207ENST00000494748 OTX2P32243 289 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms