RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CRYABP02511 175 aaKnown RBP9.26□□□□□ -0.93
CHMP3-209ENST00000494623 CD1BP29016 333 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 C17orf58Q2M2W7 97 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 VWC2Q2TAL6 325 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 CT45A1Q5HYN5 189 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 WDR25Q64LD2 544 aaPredicted RBP9.26□□□□□ -0.93
CHMP3-209ENST00000494623 ABHD12Q8N2K0 398 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 OR4F5Q8NH21 305 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 CT45A3Q8NHU0 189 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 OR4F4Q96R69 305 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 SMIM7Q9BQ49 75 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 GCM1Q9NP62 436 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 RNF7Q9UBF6 113 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 AKAP13Q12802 2813 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 ZNF292O60281 2723 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 IGLV3-9A0A075B6K5 115 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 CLDN34H7C241 214 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 RRHO14718 337 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 IGHV1-46P01743 117 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 S100A8P05109 93 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 SPCS3P61009 180 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 ADIRFQ15847 76 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 TGIF2LYQ8IUE0 185 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 CCL13Q99616 98 aa9.26□□□□□ -0.93
CHMP3-209ENST00000494623 A8MXE2 369 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 YIF1AO95070 293 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 TRGC2P03986 189 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 TCF15Q12870 199 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 RTP5Q14D33 572 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 GCSAMLQ5JQS6 135 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 SSX3Q99909 188 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 SFXN3Q9BWM7 321 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 TMEM140Q9NV12 185 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 PAGE4O60829 102 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 GYPAP02724 150 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 CGB3P0DN86 165 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 CGB7P0DN87 165 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 CD40P25942 277 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 RPP30P78346 268 aaKnown RBP9.25□□□□□ -0.93
CHMP3-209ENST00000494623 RELBQ01201 579 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 PMS2P11Q13670 270 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 ACOT6Q3I5F7 207 aaPredicted RBP9.25□□□□□ -0.93
CHMP3-209ENST00000494623 LYG1Q8N1E2 194 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 FAM210BQ96KR6 192 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 SEBOXQ9HB31 216 aaPredicted RBP9.25□□□□□ -0.93
CHMP3-209ENST00000494623 TRGV10A0A0A0MS01 117 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 TRAV38-1A0A0B4J264 116 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 KBTBD11-OT1A0A1B0GTJ5 212 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 CLN5O75503 358 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 MDKP21741 143 aaPredicted RBP9.25□□□□□ -0.93
CHMP3-209ENST00000494623 CEACAM8P31997 349 aaPredicted RBP9.25□□□□□ -0.93
CHMP3-209ENST00000494623 GNG10P50151 68 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 FAM57AQ8TBR7 257 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 GFOD1Q9NXC2 390 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 NAT8Q9UHE5 227 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 WDR83OSQ9Y284 106 aa9.25□□□□□ -0.93
CHMP3-209ENST00000494623 HCFC1P51610 2035 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 CDC34P49427 236 aaPredicted RBP9.24□□□□□ -0.93
CHMP3-209ENST00000494623 RAB7AP51149 207 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 FAM216BQ8N7L0 139 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 PATZ1Q9HBE1 687 aaKnown RBP9.24□□□□□ -0.93
CHMP3-209ENST00000494623 DOK5Q9P104 306 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 IL19Q9UHD0 177 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 SH3BGRL2Q9UJC5 107 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 DSCAMO60469 2012 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 SAA2-SAA4A0A096LPE2 208 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 FAM90A9PA6NNJ1 464 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 RBFOX2O43251 390 aaKnown RBP eCLIP9.24□□□□□ -0.93
CHMP3-209ENST00000494623 SAA2P0DJI9 122 aaPredicted RBP9.24□□□□□ -0.93
CHMP3-209ENST00000494623 GATA4P43694 442 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 VDAC2P45880 294 aaPredicted RBP9.24□□□□□ -0.93
CHMP3-209ENST00000494623 MRPS11P82912 194 aaKnown RBP9.24□□□□□ -0.93
CHMP3-209ENST00000494623 C3orf36Q3SXR2 165 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 KRTCAP3Q53RY4 240 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 C1orf87Q8N0U7 546 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 Q8N7P7 452 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 NECAP1Q8NC96 275 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 DDB2Q92466 427 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 SNRNP40Q96DI7 357 aaKnown RBP9.24□□□□□ -0.93
CHMP3-209ENST00000494623 SDSLQ96GA7 329 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 PARLQ9H300 379 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 NIT2Q9NQR4 276 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 TMEM242Q9NWH2 141 aa9.24□□□□□ -0.93
CHMP3-209ENST00000494623 PLCE1Q9P212 2302 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 SMG1Q96Q15 3661 aaKnown RBP9.23□□□□□ -0.93
CHMP3-209ENST00000494623 GFRA3O60609 400 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 MMP23AO75900 390 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 KBTBD11O94819 623 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 SMIM6P0DI80 62 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 HOXA5P20719 270 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 TNFSF4P23510 183 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 CCL8P80075 99 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 AARDQ4LEZ3 155 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 C4orf17Q53FE4 359 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 STUMQ69YW2 141 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 WFDC8Q8IUA0 241 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 ZCCHC24Q8N2G6 241 aaKnown RBP9.23□□□□□ -0.93
CHMP3-209ENST00000494623 ARL6IP6Q8N6S5 226 aa9.23□□□□□ -0.93
CHMP3-209ENST00000494623 OR52E5Q8NH55 327 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms