RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 IGSF23A1L1A6 192 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 BUB1B-PAK6H3BSN5 160 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 FCGR3BO75015 233 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 MED6O75586 246 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 HRASP01112 189 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 IGLV2-23P01705 113 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 IGHV3-7P01780 117 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 IGKV1-16P04430 117 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 ARG1P05089 322 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 CRYGBP07316 175 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 NMBP08949 121 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 OR9G9P0C7N8 305 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 PVALBP20472 110 aaPredicted RBP5.5□□□□□ -1.53
MSH5-217ENST00000494458 MDKP21741 143 aaPredicted RBP5.5□□□□□ -1.53
MSH5-217ENST00000494458 MC5RP33032 325 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 NUP62P37198 522 aaPredicted RBP5.5□□□□□ -1.53
MSH5-217ENST00000494458 VDAC2P45880 294 aaPredicted RBP5.5□□□□□ -1.53
MSH5-217ENST00000494458 PDLIM4P50479 330 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 AKR1C2P52895 323 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 PRRX1P54821 245 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 S100A10P60903 97 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 SPCS3P61009 180 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 GNB2P62879 340 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 EWSR1Q01844 656 aaKnown RBP eCLIP5.5□□□□□ -1.53
MSH5-217ENST00000494458 NHLH2Q02577 135 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 MRGPRG-AS1Q2M3A8 158 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 LDLRAD2Q5SZI1 272 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 H2BFWTQ7Z2G1 175 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 PDPNQ86YL7 162 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 CLDND2Q8NHS1 167 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 LYPD6BQ8NI32 183 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 RHOVQ96L33 236 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 GINS3Q9BRX5 216 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 MRPL20Q9BYC9 149 aaKnown RBP5.5□□□□□ -1.53
MSH5-217ENST00000494458 SLC25A31Q9H0C2 315 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 SIRPDQ9H106 197 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 BARX1Q9HBU1 254 aaPredicted RBP5.5□□□□□ -1.53
MSH5-217ENST00000494458 ZNRD1Q9P1U0 126 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 FOXA2Q9Y261 457 aaPredicted RBP5.5□□□□□ -1.53
MSH5-217ENST00000494458 ZNF257Q9Y2Q1 563 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 DOCK11Q5JSL3 2073 aa5.5□□□□□ -1.53
MSH5-217ENST00000494458 ARID1AO14497 2285 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 A0A096LNT2 108 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 IGHV2-70DA0A0C4DH43 119 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 FAM24AA6NFZ4 105 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 C15orf61A6NNL5 157 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 PRSS46E5RG02 174 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 UPK2O00526 184 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 ENSAO43768 121 aaKnown RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 OR8U8P0C7N1 319 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 SEC11BP0C7V7 166 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 SPP1P10451 314 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 TPT1P13693 172 aaKnown RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 IL3RAP26951 378 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 HTR2BP41595 481 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 LGALS7P47929 136 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 GNG10P50151 68 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 SULT1A1P50225 295 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 ATP5IP56385 69 aaPredicted RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 DSCR9P59020 149 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 HSPE1P61604 102 aaKnown RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 RPL23AP62750 156 aaKnown RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 EIF5AP63241 154 aaKnown RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 PAX8Q06710 450 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 DIAPH2-AS1Q14236 149 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 VWC2Q2TAL6 325 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 BSXQ3C1V8 233 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 RPL7L1Q6DKI1 246 aaKnown RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 OR4A47Q6IF82 309 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 CENPVQ7Z7K6 275 aaPredicted RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 HAPLN4Q86UW8 402 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 EIF4E3Q8N5X7 224 aaKnown RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 ZNF525Q8N782 197 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 OR4C13Q8NGP0 309 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 OR13D1Q8NGV5 346 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 OR4A5Q8NH83 315 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 TMEM167AQ8TBQ9 72 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 LRRC20Q8TCA0 184 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 LHX4Q969G2 390 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 AJUBAQ96IF1 538 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 CIB3Q96Q77 187 aaPredicted RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 TSNAXQ99598 290 aaKnown RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 ZNF471Q9BX82 626 aaPredicted RBP5.49□□□□□ -1.53
MSH5-217ENST00000494458 BPESC1Q9GZL8 116 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 MAGT1Q9H0U3 335 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 RBKSQ9H477 322 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 SLC35D1Q9NTN3 355 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 TMEM140Q9NV12 185 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 FBXL17Q9UF56 701 aa5.49□□□□□ -1.53
MSH5-217ENST00000494458 TRAV3A0A0B4J244 114 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 IGHV1-3A0A0C4DH29 117 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 A0A1W2PPI3 338 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 OOSP1A8MZH6 123 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 SSSCA1O60232 199 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 ATP6V1G1O75348 118 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 FOXH1O75593 365 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 SCAF4O95104 1147 aaKnown RBP5.48□□□□□ -1.53
MSH5-217ENST00000494458 SPDEFO95238 335 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 CRYZL1O95825 349 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 SCGB1D2O95969 90 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms