RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 WDR61Q9GZS3 305 aaKnown RBP4.83□□□□□ -1.64
SNX13-210ENST00000494402 POPDC3Q9HBV1 291 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 RPUSD1Q9UJJ7 312 aaKnown RBP4.83□□□□□ -1.64
SNX13-210ENST00000494402 SCN5AQ14524 2016 aa4.83□□□□□ -1.64
SNX13-210ENST00000494402 RAI1Q7Z5J4 1906 aaPredicted RBP4.83□□□□□ -1.64
SNX13-210ENST00000494402 ADAMTS13Q76LX8 1427 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 CARMIL3Q8ND23 1372 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 TRBV20OR9-2A0A075B6H5 130 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 IGLV11-55A0A075B6I3 123 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 TRAV9-1A0A075B6T8 112 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 IGHV5-51A0A0C4DH38 117 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 IGKV1-6A0A0C4DH72 117 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 IGHV7-4-1A0A0J9YVY3 117 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 A0A0J9YY10 115 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 A0A1B0GX78 115 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 TNFSF15O95150 251 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 IGKV1-39P01597 117 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 IGKV1D-39P04432 117 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 NPY1RP25929 384 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 CMPK1P30085 196 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 RBMXP38159 391 aaKnown RBP4.82□□□□□ -1.64
SNX13-210ENST00000494402 OPRK1P41145 380 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 TNFAIP8L3Q5GJ75 292 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 MORN3Q6PF18 240 aaPredicted RBP4.82□□□□□ -1.64
SNX13-210ENST00000494402 WDR59Q6PJI9 974 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 IL34Q6ZMJ4 242 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 CROCCP2Q86T23 111 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 ZNF283Q8N7M2 679 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 TMEM229BQ8NBD8 167 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 SGMS2Q8NHU3 365 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 RAB2BQ8WUD1 216 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 ISOC1Q96CN7 298 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 ZNF414Q96IQ9 312 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 IP6K3Q96PC2 410 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 C11orf68Q9H3H3 251 aaKnown RBP4.82□□□□□ -1.64
SNX13-210ENST00000494402 C8orf17Q9NRJ1 99 aa4.82□□□□□ -1.64
SNX13-210ENST00000494402 AMMECR1Q9Y4X0 333 aaPredicted RBP4.82□□□□□ -1.64
SNX13-210ENST00000494402 PTPRGP23470 1445 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 CNTLNQ9NXG0 1405 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 MYO5BQ9ULV0 1848 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 CACNA1IQ9P0X4 2223 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 IGHV5-10-1A0A0J9YXX1 117 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 A0A1W2PPR1 153 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 A8MWL6 223 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 CDS2O95674 445 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 LY6G6DO95868 133 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 INSP01308 110 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 IGHV1-8P0DP01 117 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 OPRM1P35372 400 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 GABRA2P47869 451 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 EMX2Q04743 252 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 ENDOGQ14249 297 aaKnown RBP4.81□□□□□ -1.64
SNX13-210ENST00000494402 PRSS54Q6PEW0 395 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 SUMF2Q8NBJ7 301 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 TSTD1Q8NFU3 115 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 C2orf50Q96LR7 162 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 HDHD3Q9BSH5 251 aaPredicted RBP4.81□□□□□ -1.64
SNX13-210ENST00000494402 OR2D2Q9H210 308 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 MED31Q9Y3C7 131 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 MRPS16Q9Y3D3 137 aaKnown RBP4.81□□□□□ -1.64
SNX13-210ENST00000494402 PRSS21Q9Y6M0 314 aa4.81□□□□□ -1.64
SNX13-210ENST00000494402 BCL9O00512 1426 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 LINC00862A6NCI5 91 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 DPRXA6NFQ7 191 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 K7ERU9 68 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 TRAF3IP2O43734 574 aaPredicted RBP4.8□□□□□ -1.64
SNX13-210ENST00000494402 SLPIP03973 132 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 P0C879 139 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 ZNF705DP0CH99 300 aaPredicted RBP4.8□□□□□ -1.64
SNX13-210ENST00000494402 SMIM6P0DI80 62 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 KLF3P57682 345 aaPredicted RBP4.8□□□□□ -1.64
SNX13-210ENST00000494402 HBA1P69905 142 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 FAM78AQ5JUQ0 283 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 LYRM7Q5U5X0 104 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 WDR86Q86TI4 376 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 TMEM256Q8N2U0 113 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 SLC30A7Q8NEW0 376 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 TOMM6Q96B49 74 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 RMI2Q96E14 147 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 LINC00479Q96M42 142 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 SPIN2AQ99865 258 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 SPIN2BQ9BPZ2 258 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 OR2H1Q9GZK4 316 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 OR2J1Q9GZK6 312 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 RPP21Q9H633 154 aaKnown RBP4.8□□□□□ -1.64
SNX13-210ENST00000494402 CACYBPQ9HB71 228 aaKnown RBP4.8□□□□□ -1.64
SNX13-210ENST00000494402 COL3A1P02461 1466 aaPredicted RBP4.8□□□□□ -1.64
SNX13-210ENST00000494402 OVOS2A0A0J9YW53 1432 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 OVOS2Q6IE36 1432 aa4.8□□□□□ -1.64
SNX13-210ENST00000494402 MEIKINA0A087WXM9 373 aa4.79□□□□□ -1.64
SNX13-210ENST00000494402 H0YJW9 148 aa4.79□□□□□ -1.64
SNX13-210ENST00000494402 BPY2O14599 106 aa4.79□□□□□ -1.64
SNX13-210ENST00000494402 IGKV2-30P06310 120 aa4.79□□□□□ -1.64
SNX13-210ENST00000494402 CD7P09564 240 aa4.79□□□□□ -1.64
SNX13-210ENST00000494402 TSPAN19P0C672 248 aa4.79□□□□□ -1.64
SNX13-210ENST00000494402 BCL2P10415 239 aa4.79□□□□□ -1.64
SNX13-210ENST00000494402 EVI2AP22794 236 aa4.79□□□□□ -1.64
SNX13-210ENST00000494402 SRIP30626 198 aa4.79□□□□□ -1.64
SNX13-210ENST00000494402 CCR2P41597 374 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms