RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ADAD2Q8NCV1 583 aaKnown RBP11.95□□□□□ -0.5
ACTB-213ENST00000493945 RBPMSQ93062 196 aaKnown RBP11.95□□□□□ -0.5
ACTB-213ENST00000493945 R3HDM4Q96D70 268 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 PHB2Q99623 299 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 RANBP3Q9H6Z4 567 aaPredicted RBP11.95□□□□□ -0.5
ACTB-213ENST00000493945 TNFRSF19Q9NS68 423 aa11.95□□□□□ -0.5
ACTB-213ENST00000493945 MARCH11A6NNE9 402 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 RRHO14718 337 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 KCNAB3O43448 404 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 CD24P25063 80 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 PAX6P26367 422 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 MECP2P51608 486 aaKnown RBP11.94□□□□□ -0.5
ACTB-213ENST00000493945 PPP1R1AQ13522 171 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 H2BFWTQ7Z2G1 175 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 Q8N6K4 173 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 TEX45Q8NA69 505 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 NPBQ8NG41 125 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 CASTOR1Q8WTX7 329 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 RHOVQ96L33 236 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 TP53RKQ96S44 253 aa11.94□□□□□ -0.5
ACTB-213ENST00000493945 METTL1Q9UBP6 276 aaKnown RBP11.94□□□□□ -0.5
ACTB-213ENST00000493945 SOX21Q9Y651 276 aaPredicted RBP11.94□□□□□ -0.5
ACTB-213ENST00000493945 GPR137BO60478 399 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 RAMP3O60896 148 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 SNAPC5O75971 98 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 OR2A4O95047 310 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 S1PR2O95136 353 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 NDUFA3O95167 84 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 DUS4LO95620 317 aaKnown RBP11.93□□□□□ -0.5
ACTB-213ENST00000493945 IFNA21P01568 189 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 IL5P05113 134 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 FGF2P09038 288 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 ANXA7P20073 488 aaKnown RBP11.93□□□□□ -0.5
ACTB-213ENST00000493945 UBA52P62987 128 aaKnown RBP11.93□□□□□ -0.5
ACTB-213ENST00000493945 DHRS2Q13268 280 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 THOC7Q6I9Y2 204 aaKnown RBP11.93□□□□□ -0.5
ACTB-213ENST00000493945 CCBE1Q6UXH8 406 aaPredicted RBP11.93□□□□□ -0.5
ACTB-213ENST00000493945 TMEM219Q86XT9 240 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 MRPL41Q8IXM3 137 aaKnown RBP11.93□□□□□ -0.5
ACTB-213ENST00000493945 CADM3Q8N126 398 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 TMEM230Q96A57 120 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 OR2A7Q96R45 310 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 SPIN2AQ99865 258 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 SPIN2BQ9BPZ2 258 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 MARVELD1Q9BSK0 173 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 PDCD10Q9BUL8 212 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 CHIAQ9BZP6 476 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 PRSS22Q9GZN4 317 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 BET1LQ9NYM9 111 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 FLVCR2Q9UPI3 526 aa11.93□□□□□ -0.5
ACTB-213ENST00000493945 A0A0B4J2A0 478 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 C9orf170A2RU37 121 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 SLC25A17O43808 307 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 RBMXL2O75526 392 aaKnown RBP11.92□□□□□ -0.5
ACTB-213ENST00000493945 CDS2O95674 445 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 MAS1LP35410 378 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 POU2AF1Q16633 256 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 C5orf64Q2M2E5 130 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 TMEM268Q5VZI3 342 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 LIN54Q6MZP7 749 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 MMD2Q8IY49 270 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 PIFOQ8TCI5 191 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 ZNF431Q8TF32 576 aaPredicted RBP11.92□□□□□ -0.5
ACTB-213ENST00000493945 TMEM56Q96MV1 263 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 FKBP11Q9NYL4 201 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 SHPKQ9UHJ6 478 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 TMEM56-RWDD3S4R434 201 aa11.92□□□□□ -0.5
ACTB-213ENST00000493945 SNRPGP15A8MWD9 76 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 KBTBD11O94819 623 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 KRASP01116 189 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 HLA-DRB1P01911 266 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 SAA1P0DJI8 122 aaPredicted RBP11.91□□□□□ -0.5
ACTB-213ENST00000493945 VDAC1P21796 283 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 LINC00205P59089 165 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 TMEM187Q14656 261 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 PSG5Q15238 335 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 SP6Q3SY56 376 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 PPP1R27Q86WC6 154 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 FOXRED2Q8IWF2 684 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 C5orf56Q8N8D9 126 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 GLYATL2Q8WU03 294 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 DUX5Q96PT3 197 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 TMEM140Q9NV12 185 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 PRNDQ9UKY0 176 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
ACTB-213ENST00000493945 MXRA5Q9NR99 2828 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 ZNF585BQ52M93 769 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 C9orf152Q5JTZ5 239 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 OR4A47Q6IF82 309 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 SSX9Q7RTT3 188 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 FAM71E2Q8N5Q1 922 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 LRTM2Q8N967 370 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 OR4A16Q8NH70 328 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 OR2T6Q8NHC8 308 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 LSM10Q969L4 123 aaKnown RBP11.9□□□□□ -0.5
ACTB-213ENST00000493945 TEP1Q99973 2627 aaKnown RBP11.9□□□□□ -0.5
ACTB-213ENST00000493945 GON7Q9BXV9 100 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 COMMD5Q9GZQ3 224 aa11.9□□□□□ -0.5
ACTB-213ENST00000493945 FBXL15Q9H469 300 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms