RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 OR5AN1Q8NGI8 311 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 SCRT1Q9BWW7 348 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 SMIM3Q9BZL3 60 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 GP6Q9HCN6 339 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 C20orf141Q9NUB4 165 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 WSB1Q9Y6I7 421 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 DCHS2Q6V1P9 2916 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 CELSR2Q9HCU4 2923 aa9.77□□□□□ -0.85
BRCA1-222ENST00000493919 A0A087WUU8 490 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 MAP1LC3B2A6NCE7 125 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 C11orf98E9PRG8 122 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 TAAR5O14804 337 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 NUDT3O95989 172 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 IGHV3-9P01782 118 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 PMCHP20382 165 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 NPY1RP25929 384 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 SNRPGP62308 76 aaKnown RBP9.76□□□□□ -0.85
BRCA1-222ENST00000493919 OR8B8Q15620 311 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF343Q6P1L6 599 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 MOB1BQ7L9L4 216 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 MEX3DQ86XN8 651 aaKnown RBP9.76□□□□□ -0.85
BRCA1-222ENST00000493919 C1orf174Q8IYL3 243 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 SAXO1Q8IYX7 474 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF439Q8NDP4 499 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 OR4F5Q8NH21 305 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 OR13C6PQ8NH95 151 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 TVP23CQ96ET8 276 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 CABLES2Q9BTV7 478 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 MAP1LC3BQ9GZQ8 125 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 HCFC1P51610 2035 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 IGKV3D-15A0A087WSY6 115 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 TRBV6-7A0A0A0MS04 114 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 TRBV4-1A0A0J9YWV2 114 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 KIR2DS1A0A191URI9 304 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 GAGE12JA6NER3 117 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 HMGB3O15347 200 aaKnown RBP9.76□□□□□ -0.85
BRCA1-222ENST00000493919 MRPL33O75394 65 aaKnown RBP9.76□□□□□ -0.85
BRCA1-222ENST00000493919 GAGE7O76087 117 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 CGAP01215 116 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 GAGE12FP0CL80 117 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 GAGE12GP0CL81 117 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 GAGE12IP0CL82 117 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF43P17038 809 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 EDNRAP25101 427 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 LMO1P25800 156 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 POU3F1Q03052 451 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-222ENST00000493919 GAGE4Q13068 117 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 KIR2DS1Q14954 304 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 SPATA45Q537H7 98 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 UNQ6126/PRO20091Q6UXV3 157 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF709Q8N972 641 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 SLC25A40Q8TBP6 338 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 PP6455Q8WZ26 134 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 RNASE6Q93091 150 aaKnown RBP9.76□□□□□ -0.85
BRCA1-222ENST00000493919 OXGR1Q96P68 337 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 PYGO2Q9BRQ0 406 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 CYTL1Q9NRR1 136 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 JKAMPQ9P055 326 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 CYSLTR1Q9Y271 337 aa9.76□□□□□ -0.85
BRCA1-222ENST00000493919 ANKHD1Q8IWZ3 2542 aaKnown RBP9.75□□□□□ -0.85
BRCA1-222ENST00000493919 SETXQ7Z333 2677 aaKnown RBP9.75□□□□□ -0.85
BRCA1-222ENST00000493919 TMEM129A0AVI4 362 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 ALOX5APP20292 161 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF83P51522 516 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 CAV3P56539 151 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 FAM3BP58499 235 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-222ENST00000493919 TPPP2P59282 170 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 TAS2R20P59543 309 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 PLP2Q04941 152 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 C2orf68Q2NKX9 166 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 MRPL54Q6P161 138 aaKnown RBP9.75□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF474Q6S9Z5 364 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-222ENST00000493919 ZNF429Q86V71 674 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 C1QTNF4Q9BXJ3 329 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 NPFFR1Q9GZQ6 430 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 FBXL17Q9UF56 701 aa9.75□□□□□ -0.85
BRCA1-222ENST00000493919 BORCS7-ASMTA0A0B4J1R7 106 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 CENPVL3A0A0U1RRI6 287 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 FABP5P3A8MUU1 101 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 C8orf88P0DMB2 117 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 CLDN17P56750 224 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 ADAM8P78325 824 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 FAM27E3Q08E93 113 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 PNRC1Q12796 327 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-222ENST00000493919 PPP1R8Q12972 351 aaKnown RBP9.74□□□□□ -0.85
BRCA1-222ENST00000493919 FBXL19-AS1Q494R0 122 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 ARL9Q6T311 187 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 AAED1Q7RTV5 226 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 ADAD2Q8NCV1 583 aaKnown RBP9.74□□□□□ -0.85
BRCA1-222ENST00000493919 PECRQ9BY49 303 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 SPANXCQ9NY87 97 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 KCNIP1Q9NZI2 227 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 OR1A1Q9P1Q5 309 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 FREM1Q5H8C1 2179 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 MLNRO43193 412 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 MPIG6BO95866 241 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 ASAH2BP0C7U1 165 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 VSIG10L2P0DP72 767 aa9.74□□□□□ -0.85
BRCA1-222ENST00000493919 HLA-DOBP13765 273 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms