RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 PRRX1P54821 245 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 LINC00205P59089 165 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 SURF2Q15527 256 aaPredicted RBP5.29□□□□□ -1.56
TRA2B-216ENST00000493864 Q3ZCU0 254 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 PHLDA2Q53GA4 152 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 RPL39P5Q59GN2 51 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 CYB5R2Q6BCY4 276 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 LPCAT3Q6P1A2 487 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 ZNF818PQ6ZRF7 136 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 TMED4Q7Z7H5 227 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 SLC25A42Q86VD7 318 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 ODF3L1Q8IXM7 274 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 LINC00311Q8N616 119 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 DRAM1Q8N682 238 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 ZDHHC22Q8N966 263 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 C8orf31Q8N9H6 132 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 OR13D1Q8NGV5 346 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 ZNF596Q8TC21 504 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 CAPSLQ8WWF8 208 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 LHX4Q969G2 390 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 UPRTQ96BW1 309 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 C5orf30Q96GV9 206 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 SCGB3A2Q96PL1 93 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 CLEC7AQ9BXN2 247 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 C20orf85Q9H1P6 137 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 OR2D2Q9H210 308 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 IFI27L2Q9H2X8 130 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 C5orf66Q9H5L9 145 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 PLEKHA2Q9HB19 425 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 SDHAF2Q9NX18 166 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 COPZ2Q9P299 210 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 ZNF221Q9UK13 617 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 KCNS2Q9ULS6 477 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 AUP1Q9Y679 476 aa5.29□□□□□ -1.56
TRA2B-216ENST00000493864 HIVEP2P31629 2446 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 IGHV3OR16-10A0A075B7F0 116 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 CENPVL3A0A0U1RRI6 287 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 A0A1B0GVG6 124 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 BUB1B-PAK6H3BSN5 160 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 GPR31O00270 319 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 TNFSF12O43508 249 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 PGLYRP1O75594 196 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-216ENST00000493864 IGLV1-47P01700 117 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 ARG1P05089 322 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 RAB7AP51149 207 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 RPL30P62888 115 aaKnown RBP5.28□□□□□ -1.56
TRA2B-216ENST00000493864 KRTAP1-1Q07627 177 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 EIF4EBP1Q13541 118 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-216ENST00000493864 DIAPH2-AS1Q14236 149 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 ABCA11PQ4W5N1 156 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 LDLRAD2Q5SZI1 272 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 SLC38A6Q8IZM9 456 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 LYG1Q8N1E2 194 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 ZNF645Q8N7E2 425 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 DRAXINQ8NBI3 349 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-216ENST00000493864 MINDY2Q8NBR6 621 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 OR11H6Q8NGC7 330 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 OR10X1Q8NGY0 326 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 ST6GALNAC6Q969X2 333 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 TMEM230Q96A57 120 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 RBMXL1Q96E39 390 aaKnown RBP5.28□□□□□ -1.56
TRA2B-216ENST00000493864 ZNF251Q9BRH9 671 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 SEC22CQ9BRL7 303 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 PRSS22Q9GZN4 317 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 ALX4Q9H161 411 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-216ENST00000493864 GAB2Q9UQC2 676 aa5.28□□□□□ -1.56
TRA2B-216ENST00000493864 C14orf166Q9Y224 244 aaKnown RBP5.28□□□□□ -1.56
TRA2B-216ENST00000493864 SAA2-SAA4A0A096LPE2 208 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 A0A0B4J293 547 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 TEX13DA0A0J9YY54 714 aaPredicted RBP5.27□□□□□ -1.57
TRA2B-216ENST00000493864 C9orf170A2RU37 121 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 CRYM-AS1A6NIL9 109 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 ODF3BA8MYP8 253 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 LY6LH3BQJ8 138 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 J3QLI3 93 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 M0R1X1 148 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 RAB29O14966 203 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 SLC22A5O76082 557 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 DHFRP00374 187 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 IL5P05113 134 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 OR4E1P0C645 316 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 SAA2P0DJI9 122 aaPredicted RBP5.27□□□□□ -1.57
TRA2B-216ENST00000493864 CT45A6P0DMU7 189 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 CT45A5P0DMU8 189 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 CT45A7P0DMV0 189 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 IGHV4-38-2P0DP08 117 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 PAX6P26367 422 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 REG1BP48304 166 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 UBE2E1P51965 193 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 RAG2P55895 527 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 PIGPP57054 158 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 RND3P61587 244 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 SUPT4H1P63272 117 aaKnown RBP5.27□□□□□ -1.57
TRA2B-216ENST00000493864 DHODHQ02127 395 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 PPP1R1AQ13522 171 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 MSMO1Q15800 293 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 HLA-DRB5Q30154 266 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 SP6Q3SY56 376 aa5.27□□□□□ -1.57
TRA2B-216ENST00000493864 KLF17Q5JT82 389 aaPredicted RBP5.27□□□□□ -1.57
TRA2B-216ENST00000493864 NCR3LG1Q68D85 454 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms