RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 ANXA7P20073 488 aaKnown RBP9.74□□□□□ -0.85
UPF3A-210ENST00000493727 ARHGDIBP52566 201 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 CATR1Q13166 79 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 C4orf46Q504U0 113 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 TPTE2P1Q5T6R2 138 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 DHRS7BQ6IAN0 325 aaPredicted RBP9.74□□□□□ -0.85
UPF3A-210ENST00000493727 CCDC144NLQ6NUI1 221 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 FAM71F2Q6NXP2 309 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 ZNF833PQ6ZTB9 187 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 KCTD9Q7L273 389 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 LHFPL4Q7Z7J7 247 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 ODF3L1Q8IXM7 274 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 ADAD2Q8NCV1 583 aaKnown RBP9.74□□□□□ -0.85
UPF3A-210ENST00000493727 OR51H1Q8NH63 302 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 OR5R1Q8NH85 324 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 LINC01006Q8NI28 216 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 TCTEX1D2Q8WW35 142 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 RTN4IP1Q8WWV3 396 aaPredicted RBP9.74□□□□□ -0.85
UPF3A-210ENST00000493727 C5orf30Q96GV9 206 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 HSD17B10Q99714 261 aaKnown RBP9.74□□□□□ -0.85
UPF3A-210ENST00000493727 VPREB3Q9UKI3 123 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 HILPDAQ9Y5L2 63 aa9.74□□□□□ -0.85
UPF3A-210ENST00000493727 TET2Q6N021 2002 aaPredicted RBP9.73□□□□□ -0.85
UPF3A-210ENST00000493727 TXNL1O43396 289 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 PEX14O75381 377 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 APOA2P02652 100 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 GAPDHP04406 335 aaKnown RBP9.73□□□□□ -0.85
UPF3A-210ENST00000493727 THBS3P49746 956 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 ZNF137PP52743 207 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 PROK1P58294 105 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 RND3P61587 244 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 CBX3Q13185 183 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 OXA1LQ15070 435 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 SSX2Q16385 188 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 HIST2H2BDQ6DRA6 164 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 ZNF66Q6ZN08 573 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 TBC1D26Q86UD7 250 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 SGPP2Q8IWX5 399 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 DRAXINQ8NBI3 349 aaPredicted RBP9.73□□□□□ -0.85
UPF3A-210ENST00000493727 CHPT1Q8WUD6 406 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 ADTRPQ96IZ2 230 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 GPHA2Q96T91 129 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 RTBDNQ9BSG5 229 aaPredicted RBP9.73□□□□□ -0.85
UPF3A-210ENST00000493727 MRPL20Q9BYC9 149 aaKnown RBP9.73□□□□□ -0.85
UPF3A-210ENST00000493727 C16orf95Q9H693 158 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 LIN7CQ9NUP9 197 aaKnown RBP9.73□□□□□ -0.85
UPF3A-210ENST00000493727 GAB2Q9UQC2 676 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 PRELID3BQ9Y3B1 194 aa9.73□□□□□ -0.85
UPF3A-210ENST00000493727 OOSP1A8MZH6 123 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 ZNF561-AS1K7EIQ3 104 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 MPPED1O15442 326 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 PGLYRP1O75594 196 aaPredicted RBP9.72□□□□□ -0.85
UPF3A-210ENST00000493727 TSPAN9O75954 239 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 DHFRP00374 187 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 IGLV2-14P01704 120 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 ANXA3P12429 323 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 DUTP33316 252 aaKnown RBP9.72□□□□□ -0.85
UPF3A-210ENST00000493727 KRTAP10-3P60369 221 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 UBE2MP61081 183 aaKnown RBP9.72□□□□□ -0.85
UPF3A-210ENST00000493727 ZNF816Q0VGE8 651 aaPredicted RBP9.72□□□□□ -0.85
UPF3A-210ENST00000493727 DIAPH2-AS1Q14236 149 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 OR2B11Q5JQS5 317 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 GLDNQ6ZMI3 551 aaPredicted RBP9.72□□□□□ -0.85
UPF3A-210ENST00000493727 MOB3BQ86TA1 216 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 SLC25A42Q86VD7 318 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 ST6GALNAC6Q969X2 333 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 MALSU1Q96EH3 234 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 ZNF251Q9BRH9 671 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 NAA60Q9H7X0 242 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 KCNIP3Q9Y2W7 256 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 NOTCH3Q9UM47 2321 aa9.72□□□□□ -0.85
UPF3A-210ENST00000493727 IGHV1-3A0A0C4DH29 117 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 CRYM-AS1A6NIL9 109 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 LY6LH3BQJ8 138 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 H7C2Y5 167 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 PRAF2O60831 178 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
UPF3A-210ENST00000493727 KIR2DS2P43631 304 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 PPP1R1AQ13522 171 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 RTL8BQ17RB0 113 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 TMEM128Q5BJH2 165 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 Q6ZSV7 163 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 OR8H3Q8N146 312 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 CASTOR1Q8WTX7 329 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 C17orf50Q8WW18 174 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 CAPSLQ8WWF8 208 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 TMEM230Q96A57 120 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 NABP2Q9BQ15 211 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 MARVELD1Q9BSK0 173 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 GPN1Q9HCN4 374 aaPredicted RBP9.71□□□□□ -0.86
UPF3A-210ENST00000493727 SLC35D1Q9NTN3 355 aa9.71□□□□□ -0.86
UPF3A-210ENST00000493727 IGHV3-72A0A0B4J1Y9 119 aa9.7□□□□□ -0.86
UPF3A-210ENST00000493727 C3orf85A0A1B0GTC6 90 aa9.7□□□□□ -0.86
UPF3A-210ENST00000493727 H0Y980 276 aa9.7□□□□□ -0.86
UPF3A-210ENST00000493727 FCGR3BO75015 233 aa9.7□□□□□ -0.86
UPF3A-210ENST00000493727 SERPINE2P07093 398 aa9.7□□□□□ -0.86
UPF3A-210ENST00000493727 OR5AC1P0C628 307 aa9.7□□□□□ -0.86
UPF3A-210ENST00000493727 OR4E1P0C645 316 aa9.7□□□□□ -0.86
UPF3A-210ENST00000493727 CT45A6P0DMU7 189 aa9.7□□□□□ -0.86
UPF3A-210ENST00000493727 CT45A5P0DMU8 189 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms