RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 MFNGO00587 321 aa13.11□□□□□ -0.31
COL9A1-210ENST00000493682 TUSC2O75896 110 aa13.11□□□□□ -0.31
COL9A1-210ENST00000493682 PSMD7P51665 324 aa13.11□□□□□ -0.31
COL9A1-210ENST00000493682 DEFB114Q30KQ6 69 aa13.11□□□□□ -0.31
COL9A1-210ENST00000493682 H1FOOQ8IZA3 346 aaPredicted RBP13.11□□□□□ -0.31
COL9A1-210ENST00000493682 NECAP1Q8NC96 275 aa13.11□□□□□ -0.31
COL9A1-210ENST00000493682 OR10R2Q8NGX6 335 aa13.11□□□□□ -0.31
COL9A1-210ENST00000493682 DYNLRB2Q8TF09 96 aa13.11□□□□□ -0.31
COL9A1-210ENST00000493682 WFDC10AQ9H1F0 79 aa13.11□□□□□ -0.31
COL9A1-210ENST00000493682 VCXQ9H320 206 aa13.11□□□□□ -0.31
COL9A1-210ENST00000493682 A0A075B6Q4 140 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 SAA1P0DJI8 122 aaPredicted RBP13.1□□□□□ -0.31
COL9A1-210ENST00000493682 HIST1H1DP16402 221 aaKnown RBP13.1□□□□□ -0.31
COL9A1-210ENST00000493682 EDN2P20800 178 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 MLLT11Q13015 90 aaPredicted RBP13.1□□□□□ -0.31
COL9A1-210ENST00000493682 CDK10Q15131 360 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 C10orf55Q5SWW7 151 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 TTC9CQ8N5M4 171 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 SPIN2AQ99865 258 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 SPIN2BQ9BPZ2 258 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 DUSP21Q9H596 190 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 SRD5A3Q9H8P0 318 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 TPRKBQ9Y3C4 175 aa13.1□□□□□ -0.31
COL9A1-210ENST00000493682 IGKV1D-8A0A087WSZ0 117 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 C2orf70A6NJV1 201 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 OR11H12B2RN74 326 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 PPP5D1E7EU14 171 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 RAB27BO00194 218 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 CREBL2O60519 120 aaPredicted RBP13.09□□□□□ -0.31
COL9A1-210ENST00000493682 ACTL6BO94805 426 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 FOLR2P14207 255 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 GADD45AP24522 165 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 KIR2DS2P43631 304 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 GUCA2BQ16661 112 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 C15orf32Q32M92 178 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 MMD2Q8IY49 270 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 ACOT13Q9NPJ3 140 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 ZC4H2Q9NQZ6 224 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 DMRT1Q9Y5R6 373 aa13.09□□□□□ -0.31
COL9A1-210ENST00000493682 RGS10O43665 173 aa13.08□□□□□ -0.32
COL9A1-210ENST00000493682 OR2J3O76001 311 aa13.08□□□□□ -0.32
COL9A1-210ENST00000493682 HLA-AP01891 365 aaKnown RBP13.08□□□□□ -0.32
COL9A1-210ENST00000493682 TALDO1P37837 337 aa13.08□□□□□ -0.32
COL9A1-210ENST00000493682 OR10A3P58181 314 aa13.08□□□□□ -0.32
COL9A1-210ENST00000493682 Q6ZS49 121 aa13.08□□□□□ -0.32
COL9A1-210ENST00000493682 WDR89Q96FK6 387 aaPredicted RBP13.08□□□□□ -0.32
COL9A1-210ENST00000493682 MGLLQ99685 303 aa13.08□□□□□ -0.32
COL9A1-210ENST00000493682 DCUN1D5Q9BTE7 237 aa13.08□□□□□ -0.32
COL9A1-210ENST00000493682 CENPOQ9BU64 300 aa13.08□□□□□ -0.32
COL9A1-210ENST00000493682 HMX3A6NHT5 357 aa13.07□□□□□ -0.32
COL9A1-210ENST00000493682 J3QRK9 145 aa13.07□□□□□ -0.32
COL9A1-210ENST00000493682 FCGR3BO75015 233 aa13.07□□□□□ -0.32
COL9A1-210ENST00000493682 GGCTO75223 188 aaKnown RBP13.07□□□□□ -0.32
COL9A1-210ENST00000493682 OR2C1O95371 312 aa13.07□□□□□ -0.32
COL9A1-210ENST00000493682 RAB6AP20340 208 aa13.07□□□□□ -0.32
COL9A1-210ENST00000493682 ARFRP1Q13795 201 aa13.07□□□□□ -0.32
COL9A1-210ENST00000493682 FAM209BQ5JX69 171 aa13.07□□□□□ -0.32
COL9A1-210ENST00000493682 SLC25A42Q86VD7 318 aa13.07□□□□□ -0.32
COL9A1-210ENST00000493682 CCDC90BQ9GZT6 254 aa13.07□□□□□ -0.32
COL9A1-210ENST00000493682 TECRQ9NZ01 308 aaKnown RBP13.07□□□□□ -0.32
COL9A1-210ENST00000493682 ERICH4A6NGS2 130 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 IFITM5A6NNB3 132 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 TEX22C9J3V5 150 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 LGALS9O00182 355 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 MAP2K4P45985 399 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 OR2B11Q5JQS5 317 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 C19orf35Q6ZS72 473 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 KCTD9Q7L273 389 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 ZNF645Q8N7E2 425 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 FBXL7Q9UJT9 491 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 ELF5Q9UKW6 265 aaPredicted RBP13.06□□□□□ -0.32
COL9A1-210ENST00000493682 ZNF257Q9Y2Q1 563 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 SELENOKQ9Y6D0 94 aa13.06□□□□□ -0.32
COL9A1-210ENST00000493682 TRAV1-2A0A0B4J238 106 aa13.05□□□□□ -0.32
COL9A1-210ENST00000493682 METTL21EPA6NDL7 271 aa13.05□□□□□ -0.32
COL9A1-210ENST00000493682 PDCD5O14737 125 aa13.05□□□□□ -0.32
COL9A1-210ENST00000493682 CBLN1P23435 193 aa13.05□□□□□ -0.32
COL9A1-210ENST00000493682 RPL30P62888 115 aaKnown RBP13.05□□□□□ -0.32
COL9A1-210ENST00000493682 VKORC1L1Q8N0U8 176 aa13.05□□□□□ -0.32
COL9A1-210ENST00000493682 CACNG8Q8WXS5 425 aa13.05□□□□□ -0.32
COL9A1-210ENST00000493682 OR51E2Q9H255 320 aa13.05□□□□□ -0.32
COL9A1-210ENST00000493682 RBMX2Q9Y388 322 aaKnown RBP13.05□□□□□ -0.32
COL9A1-210ENST00000493682 PRELID3BQ9Y3B1 194 aa13.05□□□□□ -0.32
COL9A1-210ENST00000493682 IGLV2-14P01704 120 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 IGHV3-23P01764 117 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 HLA-DQB1P01920 261 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 IL6RP08887 468 aaPredicted RBP13.04□□□□□ -0.32
COL9A1-210ENST00000493682 NFYAP23511 347 aaPredicted RBP13.04□□□□□ -0.32
COL9A1-210ENST00000493682 DTYMKP23919 212 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 AQP4P55087 323 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 SSX1Q16384 188 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 SLC16A13Q7RTY0 426 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 PRSS48Q7RTY5 328 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 GPHB5Q86YW7 130 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 MRPS7Q9Y2R9 242 aaKnown RBP13.04□□□□□ -0.32
COL9A1-210ENST00000493682 OR2W1Q9Y3N9 320 aa13.04□□□□□ -0.32
COL9A1-210ENST00000493682 A0A1B0GW64 132 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 NPIPB5A8MRT5 1133 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 E7EUB6 86 aa13.03□□□□□ -0.32
COL9A1-210ENST00000493682 KBTBD11O94819 623 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms