RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 RANBP3Q9H6Z4 567 aaPredicted RBP10.2□□□□□ -0.78
VPS52-220ENST00000493674 MXRA5Q9NR99 2828 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 NPFFO15130 113 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 AVPP01185 164 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 LYL1P12980 280 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 NQO2P16083 231 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 SAA4P35542 130 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 G6PCP35575 357 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 AKR1C2P52895 323 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 SMCO1Q147U7 214 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 KLF17Q5JT82 389 aaPredicted RBP10.19□□□□□ -0.78
VPS52-220ENST00000493674 PDZD9Q8IXQ8 264 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 OR11H4Q8NGC9 324 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 C17orf50Q8WW18 174 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 MALSU1Q96EH3 234 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 RRNAD1Q96FB5 475 aaKnown RBP10.19□□□□□ -0.78
VPS52-220ENST00000493674 PDCD10Q9BUL8 212 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 C11orf1Q9H5F2 150 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 C7orf69Q9H7B7 122 aa10.19□□□□□ -0.78
VPS52-220ENST00000493674 TRAV40A0A0B4J280 105 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 SRRM4A7MD48 611 aaKnown RBP10.18□□□□□ -0.78
VPS52-220ENST00000493674 H0YIZ8 118 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 TIMM23O14925 209 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 MPC2O95563 127 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 HRASP01112 189 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 KRASP01116 189 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 IGLV2-23P01705 113 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 HNRNPCP07910 306 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS52-220ENST00000493674 IGHV4-38-2P0DP08 117 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 SLC25A4P12235 298 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 CD99P14209 185 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 EPHA1P21709 976 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 CD1BP29016 333 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 KRTAP1-1Q07627 177 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 IZUMO4Q1ZYL8 232 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 ZFP69Q49AA0 526 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 CCDC144NLQ6NUI1 221 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 NOXA1Q86UR1 476 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 PUSL1Q8N0Z8 303 aaKnown RBP10.18□□□□□ -0.78
VPS52-220ENST00000493674 CIARTQ8N365 385 aaPredicted RBP10.18□□□□□ -0.78
VPS52-220ENST00000493674 OR4C13Q8NGP0 309 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 RHOVQ96L33 236 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 CACNG5Q9UF02 275 aa10.18□□□□□ -0.78
VPS52-220ENST00000493674 A0A1W2PRD5 423 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 A0A1W2PRF3 423 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 A0A1W2PRM7 423 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 FAM90A26D6RGX4 464 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 K7EPK0 472 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 VENTXO95231 258 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 TGFAP01135 160 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 MBPP02686 304 aaPredicted RBP10.17□□□□□ -0.78
VPS52-220ENST00000493674 OR9G9P0C7N8 305 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 PSMB6P28072 239 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 LGALS4P56470 323 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 ID3Q02535 119 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 FGL1Q08830 312 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 RAB32Q13637 225 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 EBI3Q14213 229 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 CYB5R2Q6BCY4 276 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 THOC7Q6I9Y2 204 aaKnown RBP10.17□□□□□ -0.78
VPS52-220ENST00000493674 OR4A47Q6IF82 309 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 H2BFWTQ7Z2G1 175 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 LURAP1LQ8IV03 231 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 FOXRED2Q8IWF2 684 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 FAM71E2Q8N5Q1 922 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 FLYWCH2Q96CP2 140 aaKnown RBP10.17□□□□□ -0.78
VPS52-220ENST00000493674 RBMXL1Q96E39 390 aaKnown RBP10.17□□□□□ -0.78
VPS52-220ENST00000493674 HYLS1Q96M11 299 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 RNF5Q99942 180 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 AIFM2Q9BRQ8 373 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 RNF126Q9BV68 326 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 MS4A7Q9GZW8 240 aaPredicted RBP10.17□□□□□ -0.78
VPS52-220ENST00000493674 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 BET1LQ9NYM9 111 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 RCL1Q9Y2P8 373 aaKnown RBP10.17□□□□□ -0.78
VPS52-220ENST00000493674 HILPDAQ9Y5L2 63 aa10.17□□□□□ -0.78
VPS52-220ENST00000493674 IGHV3-72A0A0B4J1Y9 119 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 HMSDA8MTL9 139 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 H7C2Y5 167 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 CRYGBP07316 175 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 FGF2P09038 288 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 LGALS7P47929 136 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 ERVK-16P61578 105 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 RELBQ01201 579 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 SSX2Q16385 188 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 PDLIM3Q53GG5 364 aaPredicted RBP10.16□□□□□ -0.78
VPS52-220ENST00000493674 GPR157Q5UAW9 335 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 RUSC1-AS1Q66K80 236 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 PRSS54Q6PEW0 395 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 TMEM65Q6PI78 240 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 MOB3BQ86TA1 216 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 VKORC1L1Q8N0U8 176 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 Q8N6K4 173 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 DMBX1Q8NFW5 382 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 RNASE11Q8TAA1 199 aaKnown RBP10.16□□□□□ -0.78
VPS52-220ENST00000493674 HARBI1Q96MB7 349 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 ZFP57Q9NU63 452 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 GSKIPQ9P0R6 139 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 POMT1Q9Y6A1 747 aa10.16□□□□□ -0.78
VPS52-220ENST00000493674 C15orf61A6NNL5 157 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms