RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TMEM186Q96B77 213 aa11.48□□□□□ -0.57
PTPN7-216ENST00000492977 RHOVQ96L33 236 aa11.48□□□□□ -0.57
PTPN7-216ENST00000492977 OR8B2Q96RD0 313 aa11.48□□□□□ -0.57
PTPN7-216ENST00000492977 QTRT1Q9BXR0 403 aaKnown RBP11.48□□□□□ -0.57
PTPN7-216ENST00000492977 PARD6GQ9BYG4 376 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-216ENST00000492977 TMEM140Q9NV12 185 aa11.48□□□□□ -0.57
PTPN7-216ENST00000492977 DOCK11Q5JSL3 2073 aa11.48□□□□□ -0.57
PTPN7-216ENST00000492977 CEBPZOSA8MTT3 80 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 RBP4P02753 201 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 AVPI1Q5T686 147 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 Q6ZRG5 221 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 HAPLN4Q86UW8 402 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 ZNF429Q86V71 674 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 C11orf42Q8N5U0 333 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 ZNF525Q8N782 197 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 OR10X1Q8NGY0 326 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 NEIL1Q96FI4 390 aaPredicted RBP11.47□□□□□ -0.57
PTPN7-216ENST00000492977 LINC00052Q96N35 136 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 HRH4Q9H3N8 390 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 CHODLQ9H9P2 273 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 SLC35D1Q9NTN3 355 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 ITPR1Q14643 2758 aa11.47□□□□□ -0.57
PTPN7-216ENST00000492977 A0A1W2PPR1 153 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 PPIHO43447 177 aaKnown RBP11.46□□□□□ -0.57
PTPN7-216ENST00000492977 IFNA17P01571 189 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 OR8U8P0C7N1 319 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 ZNF137PP52743 207 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 RPP30P78346 268 aaKnown RBP11.46□□□□□ -0.57
PTPN7-216ENST00000492977 ARL16Q0P5N6 197 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 ATP6V1FQ16864 119 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 VKORC1L1Q8N0U8 176 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 ABHD12Q8N2K0 398 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 LILRB2Q8N423 598 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 SCGB1C1Q8TD33 95 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 C17orf50Q8WW18 174 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 TNFRSF14Q92956 283 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 CLCC1Q96S66 551 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 TMEM133Q9H2Q1 129 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 ZNRD1Q9P1U0 126 aa11.46□□□□□ -0.57
PTPN7-216ENST00000492977 SPTBN1Q01082 2364 aaKnown RBP11.46□□□□□ -0.57
PTPN7-216ENST00000492977 C19orf84I3L1E1 186 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 APOA2P02652 100 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 PRH1P02810 166 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 CAMLGP49069 296 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 OR2B8PP59922 312 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 SLC38A11Q08AI6 406 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 WDR25Q64LD2 544 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-216ENST00000492977 OR4A47Q6IF82 309 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 TMEM182Q6ZP80 229 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-216ENST00000492977 COMMD1Q8N668 190 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 OR5AN1Q8NGI8 311 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 OR13D1Q8NGV5 346 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 ST6GALNAC6Q969X2 333 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 OR4C12Q96R67 309 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 NUP50Q9UKX7 468 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 FOXA2Q9Y261 457 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-216ENST00000492977 PPIAL4CA0A0B4J2A2 164 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 hCG_1809904A0A1W2PP81 198 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 A0A1W2PPE2 198 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 A0A1W2PR64 198 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 A0A1W2PRV1 198 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 C15orf61A6NNL5 157 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 LY6HO94772 140 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 GOSR1O95249 250 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 IL6RP08887 468 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-216ENST00000492977 PPIAL4GP0DN37 164 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 IL3RAP26951 378 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 GNB2P62879 340 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 LRRC75BQ2VPJ9 315 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 BPIFCQ8NFQ6 507 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 OR10P1Q8NGE3 313 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 OSR1Q8TAX0 266 aaPredicted RBP11.45□□□□□ -0.58
PTPN7-216ENST00000492977 PINX1Q96BK5 328 aaKnown RBP11.45□□□□□ -0.58
PTPN7-216ENST00000492977 MRPL20Q9BYC9 149 aaKnown RBP11.45□□□□□ -0.58
PTPN7-216ENST00000492977 HIPK2Q9H2X6 1198 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 TMEM14BQ9NUH8 114 aa11.45□□□□□ -0.58
PTPN7-216ENST00000492977 TRAV3A0A0B4J244 114 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 A6NNC1 897 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 PMS2P5A8MQ11 134 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 H0YJW9 148 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 PRRX1P54821 245 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 OR8G2PQ6IF36 304 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 DPPA3Q6W0C5 159 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 THNSL2Q86YJ6 484 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 PUSL1Q8N0Z8 303 aaKnown RBP11.44□□□□□ -0.58
PTPN7-216ENST00000492977 LY6G5BQ8NDX9 201 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 PCGF1Q9BSM1 259 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 PSMG3Q9BT73 122 aaPredicted RBP11.44□□□□□ -0.58
PTPN7-216ENST00000492977 UBTD1Q9HAC8 227 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 PATZ1Q9HBE1 687 aaKnown RBP11.44□□□□□ -0.58
PTPN7-216ENST00000492977 PRNDQ9UKY0 176 aa11.44□□□□□ -0.58
PTPN7-216ENST00000492977 MALRD1Q5VYJ5 2156 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 TSPAN15O95858 294 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 IGKV1-16P04430 117 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 ARG1P05089 322 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 VDAC2P45880 294 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-216ENST00000492977 HSPE1P61604 102 aaKnown RBP11.43□□□□□ -0.58
PTPN7-216ENST00000492977 RUNX1Q01196 453 aa11.43□□□□□ -0.58
PTPN7-216ENST00000492977 ZNF616Q08AN1 781 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms