RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 FOLR2P14207 255 aa12.71□□□□□ -0.38
TNFRSF1B-203ENST00000492361 UTF1Q5T230 341 aa12.71□□□□□ -0.38
TNFRSF1B-203ENST00000492361 OR4X1Q8NH49 305 aa12.71□□□□□ -0.38
TNFRSF1B-203ENST00000492361 FAM216AQ8WUB2 273 aa12.71□□□□□ -0.38
TNFRSF1B-203ENST00000492361 GMPPAQ96IJ6 420 aaPredicted RBP12.71□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SGK494Q96LW2 274 aa12.71□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CXXC4Q9H2H0 198 aa12.71□□□□□ -0.38
TNFRSF1B-203ENST00000492361 PLEKHA3Q9HB20 300 aa12.71□□□□□ -0.38
TNFRSF1B-203ENST00000492361 IGHV3-21A0A0B4J1V1 117 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 C17orf112F2Z3M2 114 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 RRHO14718 337 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 TOX4O94842 621 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 COX5BP10606 129 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CD81P60033 236 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SPRNQ5BIV9 151 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 OR8G5Q8NG78 346 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ACY3Q96HD9 319 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CCL13Q99616 98 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 DDA1Q9BW61 102 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 KIAA1549Q9HCM3 1950 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 MAP1AP78559 2803 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 DUXBA0A1W2PPF3 345 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CD1BP29016 333 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ACOT6Q3I5F7 207 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 WDR82Q6UXN9 313 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 NEIL1Q96FI4 390 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 IMMP2LQ96T52 175 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 A0A087X0M5 115 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 MDFIC2A0A1B0GVS7 189 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 A0A1B0GX30 115 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 IGLV2-14P01704 120 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 IGHV2-5P01817 119 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 Q6ZSR3 168 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 WFDC8Q8IUA0 241 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 OR2T10Q8NGZ9 312 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ITLN1Q8WWA0 313 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 HSD17B10Q99714 261 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 NPCDR1Q9BY65 106 aa12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CISD1Q9NZ45 108 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SLC17A3O00476 420 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 RNF224P0DH78 156 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 TNFSF10P50591 281 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 RPL23P62829 140 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SSX2Q16385 188 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 GABRA6Q16445 453 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ACP7Q6ZNF0 438 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 NHLRC2Q8NBF2 726 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 OR4P4Q8NGL7 312 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CTXND1A0A1B0GTU2 59 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 IFITM10A6NMD0 228 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 KITLGP21583 273 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SERF2P84101 59 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 WIPI2Q9Y4P8 454 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 A0A1B0GV90 55 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 PLAUP00749 431 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ZNF90Q03938 601 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 MOB3BQ86TA1 216 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SGMS2Q8NHU3 365 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 LSM10Q969L4 123 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 DCAF16Q9NXF7 216 aa12.69□□□□□ -0.38
TNFRSF1B-203ENST00000492361 TMPRSS2O15393 492 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SLC31A2O15432 143 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 TRAPPC1Q9Y5R8 145 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 NAV3Q8IVL0 2385 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 F6UZH7 168 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SELENOVP59797 346 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 KRTAP27-1Q3LI81 207 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 KIAA1644Q3SXP7 199 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 UNQ6494/PRO21346Q6UXR6 183 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 COL4A2P08572 1712 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 WT1P19544 449 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 MLANAQ16655 118 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SARAFQ96BY9 339 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 EGLN1Q9GZT9 426 aa12.68□□□□□ -0.38
TNFRSF1B-203ENST00000492361 KALRNO60229 2985 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 PRR27Q6MZM9 219 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 C5orf30Q96GV9 206 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 TAAR6Q96RI8 345 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 IGHV3-72A0A0B4J1Y9 119 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 GZMHP20718 246 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 SPATA31B1PQ5VZV4 182 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 C1QL4Q86Z23 238 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 TGIF2LYQ8IUE0 185 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 PPP1R35Q8TAP8 253 aa12.67□□□□□ -0.38
TNFRSF1B-203ENST00000492361 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.67□□□□□ -0.382e-8■■■■□ 19.7
TNFRSF1B-203ENST00000492361 HIST3H2BBQ8N257 126 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 C11orf1Q9H5F2 150 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ZDHHC11Q9H8X9 412 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 ZNF71Q9NQZ8 489 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 TACC2O95359 2948 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 G0S2P27469 103 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 KIR2DL2P43627 348 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 FAM27E3Q08E93 113 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 PNRC1Q12796 327 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 OR5I1Q13606 314 aa12.66□□□□□ -0.38
TNFRSF1B-203ENST00000492361 FXYD3Q14802 87 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms