RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 PDZD2O15018 2839 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 H7C2Y5 167 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 SHOXO15266 292 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 ST8SIA3O43173 380 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 CD5LO43866 347 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 S1PR2O95136 353 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 CRYZL1O95825 349 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 IGKV1-5P01602 117 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 PVALBP20472 110 aaPredicted RBP7.79□□□□□ -1.16
USP54-214ENST00000492357 C4BPBP20851 252 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 SAA4P35542 130 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 NKX2-1P43699 371 aaPredicted RBP7.79□□□□□ -1.16
USP54-214ENST00000492357 TAS2R30P59541 319 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 CD83Q01151 205 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 ID3Q02535 119 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 ZFP69Q49AA0 526 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
USP54-214ENST00000492357 MRPL41Q8IXM3 137 aaKnown RBP7.79□□□□□ -1.16
USP54-214ENST00000492357 PUSL1Q8N0Z8 303 aaKnown RBP7.79□□□□□ -1.16
USP54-214ENST00000492357 OR4D5Q8NGN0 318 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 OR2T10Q8NGZ9 312 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 OR5B3Q8NH48 314 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 THAP6Q8TBB0 222 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 TMEM167AQ8TBQ9 72 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 OR10C1Q96KK4 312 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 HARBI1Q96MB7 349 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 CIB3Q96Q77 187 aaPredicted RBP7.79□□□□□ -1.16
USP54-214ENST00000492357 RANGRFQ9HD47 186 aaPredicted RBP7.79□□□□□ -1.16
USP54-214ENST00000492357 C1RLQ9NZP8 487 aa7.79□□□□□ -1.16
USP54-214ENST00000492357 TRAV40A0A0B4J280 105 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 C13orf42A0A1B0GVH6 325 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 FAM25EA8MYX2 175 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 INS-IGF2F8WCM5 200 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 TSPAN9O75954 239 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 VENTXO95231 258 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 MPC2O95563 127 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 MOSP00540 346 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 KRASP01116 189 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 FAM106CPP0CH98 169 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 KLRD1Q13241 179 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 C2orf68Q2NKX9 166 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 PRSS54Q6PEW0 395 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 C16orf82Q7Z2V1 217 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 HSD17B13Q7Z5P4 300 aaPredicted RBP7.78□□□□□ -1.16
USP54-214ENST00000492357 MOB3BQ86TA1 216 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 MMD2Q8IY49 270 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 FAM71E2Q8N5Q1 922 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 DRAXINQ8NBI3 349 aaPredicted RBP7.78□□□□□ -1.16
USP54-214ENST00000492357 DMBX1Q8NFW5 382 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 NPBQ8NG41 125 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 PPP1R1CQ8WVI7 109 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 GPR146Q96CH1 333 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 RAB40CQ96S21 281 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 SRSF8Q9BRL6 282 aaKnown RBP7.78□□□□□ -1.16
USP54-214ENST00000492357 PRDM13Q9H4Q3 707 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 HSPB7Q9UBY9 170 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 PITPNC1Q9UKF7 332 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 NUP50Q9UKX7 468 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 FOXA2Q9Y261 457 aaPredicted RBP7.78□□□□□ -1.16
USP54-214ENST00000492357 POMT1Q9Y6A1 747 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 HECTD1Q9ULT8 2610 aa7.78□□□□□ -1.16
USP54-214ENST00000492357 WNK2Q9Y3S1 2297 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 ITPR2Q14571 2701 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 C15orf61A6NNL5 157 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 E5RGE8 158 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 M0QZK8 103 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 CCSO14618 274 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 TIMM23O14925 209 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 GPR137BO60478 399 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 KBTBD11O94819 623 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 NDUFA3O95167 84 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 IGKV1-16P04430 117 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 HNRNPCP07910 306 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP54-214ENST00000492357 HNF1AP20823 631 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 SPCS3P61009 180 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 RPS16P62249 146 aaKnown RBP7.77□□□□□ -1.17
USP54-214ENST00000492357 ZNF345Q14585 488 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 SSX2Q16385 188 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 LDLRAD2Q5SZI1 272 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 OR4A47Q6IF82 309 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 C11orf87Q6NUJ2 197 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 NOXA1Q86UR1 476 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 Q8N6K4 173 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 OR4A16Q8NH70 328 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 OR1S1Q8NH92 325 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 AJUBAQ96IF1 538 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 GPHA2Q96T91 129 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 TMEM14BQ9NUH8 114 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 TMEM140Q9NV12 185 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 CACNG5Q9UF02 275 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 ITGB1BP2Q9UKP3 347 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 NSG2Q9Y328 171 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 FAM96BQ9Y3D0 163 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 WSB1Q9Y6I7 421 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 ARHGAP32A7KAX9 2087 aa7.77□□□□□ -1.17
USP54-214ENST00000492357 WRBO00258 174 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 UPK2O00526 184 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 FGF16O43320 207 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 DEDDO75618 318 aa7.76□□□□□ -1.17
USP54-214ENST00000492357 OR2F2O95006 317 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms