RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 VKORC1L1Q8N0U8 176 aa19.1■□□□□ 0.65
UPF3A-209ENST00000492270 MFSD4AQ8N468 514 aa19.1■□□□□ 0.65
UPF3A-209ENST00000492270 MRPS26Q9BYN8 205 aaKnown RBP19.1■□□□□ 0.65
UPF3A-209ENST00000492270 MRPS7Q9Y2R9 242 aaKnown RBP19.1■□□□□ 0.65
UPF3A-209ENST00000492270 HPGDSO60760 199 aa19.09■□□□□ 0.65
UPF3A-209ENST00000492270 TRGV3P03979 118 aa19.09■□□□□ 0.65
UPF3A-209ENST00000492270 OR8U8P0C7N1 319 aa19.09■□□□□ 0.65
UPF3A-209ENST00000492270 DEFA5Q01523 94 aa19.09■□□□□ 0.65
UPF3A-209ENST00000492270 POC5Q8NA72 575 aa19.09■□□□□ 0.65
UPF3A-209ENST00000492270 ACOT12Q8WYK0 555 aa19.09■□□□□ 0.65
UPF3A-209ENST00000492270 SLC5A7Q9GZV3 580 aa19.09■□□□□ 0.65
UPF3A-209ENST00000492270 ZNF430Q9H8G1 570 aaPredicted RBP19.09■□□□□ 0.65
UPF3A-209ENST00000492270 ZNF355PQ9NSJ1 428 aa19.09■□□□□ 0.65
UPF3A-209ENST00000492270 EHFQ9NZC4 300 aa19.09■□□□□ 0.65
UPF3A-209ENST00000492270 IGHV4OR15-8A0A075B7B6 117 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 A0A087WW49 117 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 APOA1P02647 267 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 ELK1P19419 428 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 PRSS3P35030 304 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 RFX2P48378 723 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 SLURP1P55000 103 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 ZNF66Q6ZN08 573 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 TMEM17Q86X19 198 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 OR4S2Q8NH73 311 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 GIMAP1Q8WWP7 306 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 SRSF12Q8WXF0 261 aaKnown RBP19.08■□□□□ 0.64
UPF3A-209ENST00000492270 SLA2Q9H6Q3 261 aa19.08■□□□□ 0.64
UPF3A-209ENST00000492270 MSGN1A6NI15 193 aa19.07■□□□□ 0.64
UPF3A-209ENST00000492270 SEC14L6B5MCN3 397 aa19.07■□□□□ 0.64
UPF3A-209ENST00000492270 PMP2P02689 132 aa19.07■□□□□ 0.64
UPF3A-209ENST00000492270 CD40LGP29965 261 aa19.07■□□□□ 0.64
UPF3A-209ENST00000492270 ALDH3B2P48448 385 aa19.07■□□□□ 0.64
UPF3A-209ENST00000492270 RORCP51449 518 aa19.07■□□□□ 0.64
UPF3A-209ENST00000492270 C10orf55Q5SWW7 151 aa19.07■□□□□ 0.64
UPF3A-209ENST00000492270 PHB2Q99623 299 aa19.07■□□□□ 0.64
UPF3A-209ENST00000492270 NAT1P18440 290 aa19.06■□□□□ 0.64
UPF3A-209ENST00000492270 MSMO1Q15800 293 aa19.06■□□□□ 0.64
UPF3A-209ENST00000492270 C9orf66Q5T8R8 295 aa19.06■□□□□ 0.64
UPF3A-209ENST00000492270 ZNF818PQ6ZRF7 136 aa19.06■□□□□ 0.64
UPF3A-209ENST00000492270 DCUN1D4Q92564 292 aa19.06■□□□□ 0.64
UPF3A-209ENST00000492270 RHOVQ96L33 236 aa19.06■□□□□ 0.64
UPF3A-209ENST00000492270 CMTM3Q96MX0 182 aa19.06■□□□□ 0.64
UPF3A-209ENST00000492270 LINC01619G3V211 115 aa19.05■□□□□ 0.64
UPF3A-209ENST00000492270 RAMP3O60896 148 aa19.05■□□□□ 0.64
UPF3A-209ENST00000492270 SNX29P2Q8IUI4 249 aa19.05■□□□□ 0.64
UPF3A-209ENST00000492270 GPX8Q8TED1 209 aa19.05■□□□□ 0.64
UPF3A-209ENST00000492270 DLX4Q92988 240 aaPredicted RBP19.05■□□□□ 0.64
UPF3A-209ENST00000492270 COA4Q9NYJ1 87 aa19.05■□□□□ 0.64
UPF3A-209ENST00000492270 SCOCQ9UIL1 159 aa19.05■□□□□ 0.64
UPF3A-209ENST00000492270 H3BUA1 57 aa19.04■□□□□ 0.64
UPF3A-209ENST00000492270 HERV-K104P61576 105 aa19.04■□□□□ 0.64
UPF3A-209ENST00000492270 DYRK1AQ13627 763 aa19.04■□□□□ 0.64
UPF3A-209ENST00000492270 GPR141Q7Z602 305 aa19.04■□□□□ 0.64
UPF3A-209ENST00000492270 LYSMD2Q8IV50 215 aa19.04■□□□□ 0.64
UPF3A-209ENST00000492270 MMD2Q8IY49 270 aa19.04■□□□□ 0.64
UPF3A-209ENST00000492270 ZBTB34Q8NCN2 500 aa19.04■□□□□ 0.64
UPF3A-209ENST00000492270 OR5H2Q8NGV7 314 aa19.04■□□□□ 0.64
UPF3A-209ENST00000492270 TMEM68Q96MH6 324 aa19.04■□□□□ 0.64
UPF3A-209ENST00000492270 ZNF2Q9BSG1 426 aaPredicted RBP19.04■□□□□ 0.64
UPF3A-209ENST00000492270 SMIM31A0A1B0GVY4 71 aa19.03■□□□□ 0.64
UPF3A-209ENST00000492270 SULT1C2O00338 296 aa19.03■□□□□ 0.64
UPF3A-209ENST00000492270 KBTBD11O94819 623 aa19.03■□□□□ 0.64
UPF3A-209ENST00000492270 HLA-DMAP28067 261 aa19.03■□□□□ 0.64
UPF3A-209ENST00000492270 TAS2R46P59540 309 aa19.03■□□□□ 0.64
UPF3A-209ENST00000492270 DGCR2P98153 550 aa19.03■□□□□ 0.64
UPF3A-209ENST00000492270 SSX9Q7RTT3 188 aa19.03■□□□□ 0.64
UPF3A-209ENST00000492270 SPAG16Q8N0X2 631 aa19.03■□□□□ 0.64
UPF3A-209ENST00000492270 PUSL1Q8N0Z8 303 aaKnown RBP19.03■□□□□ 0.64
UPF3A-209ENST00000492270 TINAGL1Q9GZM7 467 aaPredicted RBP19.03■□□□□ 0.64
UPF3A-209ENST00000492270 FAM25AB3EWG3 89 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 FAM25CB3EWG5 89 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 FAM25GB3EWG6 89 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 OVOL1O14753 267 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 RBMXL2O75526 392 aaKnown RBP19.02■□□□□ 0.64
UPF3A-209ENST00000492270 OR2A4O95047 310 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 ZNF182P17025 639 aaPredicted RBP19.02■□□□□ 0.64
UPF3A-209ENST00000492270 GNRHRP30968 328 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 HRH1P35367 487 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 KIR2DS2P43631 304 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 DHRS11Q6UWP2 260 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 ADAD2Q8NCV1 583 aaKnown RBP19.02■□□□□ 0.64
UPF3A-209ENST00000492270 OR51H1Q8NH63 302 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 MOB3AQ96BX8 217 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 OR2A7Q96R45 310 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 FXYD6Q9H0Q3 95 aa19.02■□□□□ 0.64
UPF3A-209ENST00000492270 C13orf42A0A1B0GVH6 325 aa19.01■□□□□ 0.63
UPF3A-209ENST00000492270 MPPED1O15442 326 aa19.01■□□□□ 0.63
UPF3A-209ENST00000492270 CREBL2O60519 120 aaPredicted RBP19.01■□□□□ 0.63
UPF3A-209ENST00000492270 ACTL6BO94805 426 aa19.01■□□□□ 0.63
UPF3A-209ENST00000492270 HSPB1P04792 205 aaKnown RBP19.01■□□□□ 0.63
UPF3A-209ENST00000492270 MZT2AQ6P582 158 aa19.01■□□□□ 0.63
UPF3A-209ENST00000492270 TMEM167AQ8TBQ9 72 aa19.01■□□□□ 0.63
UPF3A-209ENST00000492270 PRH1P02810 166 aa19■□□□□ 0.63
UPF3A-209ENST00000492270 OR9G9P0C7N8 305 aa19■□□□□ 0.63
UPF3A-209ENST00000492270 CATR1Q13166 79 aa19■□□□□ 0.63
UPF3A-209ENST00000492270 SPCS2Q15005 226 aa19■□□□□ 0.63
UPF3A-209ENST00000492270 RNASE12Q5GAN4 147 aaKnown RBP19■□□□□ 0.63
UPF3A-209ENST00000492270 DEFB121Q5J5C9 76 aa19■□□□□ 0.63
UPF3A-209ENST00000492270 VSTM2AQ8TAG5 236 aa19■□□□□ 0.63
UPF3A-209ENST00000492270 AP3S1Q92572 193 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms