RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 HAGHQ16775 308 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 PYY3Q5JQD4 70 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 AKR1C8PQ5T2L2 129 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 BRICD5Q6PL45 260 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 C1orf229Q6ZS94 237 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-219ENST00000491747 SLC35E3Q7Z769 313 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 ZNF429Q86V71 674 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 OR13D1Q8NGV5 346 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 LRRC29Q8WV35 223 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 TMEM56Q96MV1 263 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 TECTBQ96PL2 329 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 PFDN5Q99471 154 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 OR51I2Q9H344 312 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 C11orf1Q9H5F2 150 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 CTSZQ9UBR2 303 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 TMEM56-RWDD3S4R434 201 aa7.76□□□□□ -1.17
BRCA1-219ENST00000491747 IGKV1-12A0A0C4DH73 117 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 SCAF4O95104 1147 aaKnown RBP7.75□□□□□ -1.17
BRCA1-219ENST00000491747 IGKV1D-12P01611 117 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 MMP9P14780 707 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 FUT3P21217 361 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 FUT6P51993 359 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 ZNF506Q5JVG8 444 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 PLCXD3Q63HM9 321 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 DPPA3Q6W0C5 159 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 ZNF841Q6ZN19 808 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 FAM90A1Q86YD7 464 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 Q8WTZ3 238 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 HIPK2Q9H2X6 1198 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 MXRA5Q9NR99 2828 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 OOEPA6NGQ2 149 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 TMEM210A6NLX4 147 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 ZNF727A8MUV8 499 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 B4DEV8 164 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 OR7C1O76099 320 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-219ENST00000491747 GYPAP02724 150 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 TFF1P04155 84 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 TK1P04183 234 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 GNRHRP30968 328 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 RBM11P57052 281 aaKnown RBP7.75□□□□□ -1.17
BRCA1-219ENST00000491747 KHDC3LQ587J8 217 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 SPIN3Q5JUX0 258 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 TEX36Q5VZQ5 186 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 DUX4L9Q6RFH8 374 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-219ENST00000491747 ZNF600Q6ZNG1 722 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 TBC1D26Q86UD7 250 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 CYB561D1Q8N8Q1 229 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 OR5A2Q8NGI9 324 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2AAQ96QV6 131 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 ABHD14AQ9BUJ0 271 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 CDC42EP3Q9UKI2 254 aa7.75□□□□□ -1.17
BRCA1-219ENST00000491747 ELOA3CA0A087WX78 387 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-219ENST00000491747 PPP1R2P9O14990 202 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 VDAC1P21796 283 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 CFHR2P36980 270 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 GLIPR1P48060 266 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 RPL23AP62750 156 aaKnown RBP7.74□□□□□ -1.17
BRCA1-219ENST00000491747 GNG3P63215 75 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 DEFA6Q01524 100 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 PAX2Q02962 417 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 ICAM4Q14773 271 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 CMTM1Q8IZ96 169 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 FGFRL1Q8N441 504 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 NEIL1Q96FI4 390 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-219ENST00000491747 POLR3KQ9Y2Y1 108 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-219ENST00000491747 URGCP-MRPS24S4R325 110 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 PIGBOS1A0A0B4J2F0 54 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 IFITM10A6NMD0 228 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 SRRM5B3KS81 715 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 CYB5BO43169 146 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 ADAM20O43506 726 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2BKO60814 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 CST7O76096 145 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2BJP06899 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 CXCL1P09341 107 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2BOP23527 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2BBP33778 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 DYNLT3P51808 116 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2BDP58876 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 ERVFRD-1P60508 538 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2BCP62807 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 PNRC1Q12796 327 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST2H2BEQ16778 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-219ENST00000491747 ZNF343Q6P1L6 599 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 Q6ZS49 121 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 TMEM217Q8N7C4 229 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 OR10G4Q8NGN3 311 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2BHQ93079 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2BNQ99877 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 HIST1H2BMQ99879 126 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 SSBP3Q9BWW4 388 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-219ENST00000491747 GFOD1Q9NXC2 390 aa7.74□□□□□ -1.17
BRCA1-219ENST00000491747 TRAV38-1A0A0B4J264 116 aa7.73□□□□□ -1.17
BRCA1-219ENST00000491747 OR5B21A6NL26 309 aa7.73□□□□□ -1.17
BRCA1-219ENST00000491747 TGOLN2O43493 480 aa7.73□□□□□ -1.17
BRCA1-219ENST00000491747 SYNGR1O43759 233 aa7.73□□□□□ -1.17
BRCA1-219ENST00000491747 FOXH1O75593 365 aa7.73□□□□□ -1.17
BRCA1-219ENST00000491747 DFFBO76075 338 aa7.73□□□□□ -1.17
BRCA1-219ENST00000491747 RD3LP0DJH9 198 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms