RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 OVOL1O14753 267 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 ACTL6BO94805 426 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 PPYP01298 95 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 IGLV2-14P01704 120 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 FCER2P06734 321 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 SAA1P0DJI8 122 aaPredicted RBP11.68□□□□□ -0.54
USP39-217ENST00000491659 AADACP22760 399 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 NCS1P62166 190 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 RPL30P62888 115 aaKnown RBP11.68□□□□□ -0.54
USP39-217ENST00000491659 CDK10Q15131 360 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 MSMO1Q15800 293 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 PRSS8Q16651 343 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 ZNF66Q6ZN08 573 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 IDO2Q6ZQW0 420 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 OR5T1Q8NG75 326 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
USP39-217ENST00000491659 SNAPC3Q92966 411 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 DGCR14Q96DF8 476 aaKnown RBP11.68□□□□□ -0.54
USP39-217ENST00000491659 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
USP39-217ENST00000491659 A0A0G2JLM5 398 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 MPPED1O15442 326 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 HSPB1P04792 205 aaKnown RBP11.67□□□□□ -0.54
USP39-217ENST00000491659 KIR2DS2P43631 304 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 INSL3P51460 131 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 SLURP1P55000 103 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 TAS2R20P59543 309 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 FXYD4P59646 89 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 VBP1P61758 197 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 MMD2Q8IY49 270 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 OR5AP2Q8NGF4 316 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 VSTM2AQ8TAG5 236 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 DCUN1D4Q92564 292 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 RHOVQ96L33 236 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 SLC5A7Q9GZV3 580 aa11.67□□□□□ -0.54
USP39-217ENST00000491659 ZNF430Q9H8G1 570 aaPredicted RBP11.67□□□□□ -0.54
USP39-217ENST00000491659 CCDC160A6NGH7 325 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 TNFSF12O43508 249 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 APELAP0DMC3 54 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 ECI1P42126 302 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 HERV-K104P61576 105 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 CATR1Q13166 79 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 EIF4EBP1Q13541 118 aaPredicted RBP11.66□□□□□ -0.54
USP39-217ENST00000491659 MRGPRG-AS1Q2M3A8 158 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 GPR141Q7Z602 305 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 MFSD4AQ8N468 514 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 ZBTB34Q8NCN2 500 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 CCL28Q9NRJ3 127 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 EHFQ9NZC4 300 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 COMMD3Q9UBI1 195 aa11.66□□□□□ -0.54
USP39-217ENST00000491659 MSGN1A6NI15 193 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 SAP30O75446 220 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 BRI3O95415 125 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 EIF4EP06730 217 aaKnown RBP11.65□□□□□ -0.54
USP39-217ENST00000491659 PRSS3P35030 304 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 ALDH3B2P48448 385 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 TAS2R46P59540 309 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 ZNF429Q86V71 674 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 TMEM17Q86X19 198 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 GIMAP1Q8WWP7 306 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 DLX4Q92988 240 aaPredicted RBP11.65□□□□□ -0.54
USP39-217ENST00000491659 BORCS5Q969J3 196 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 CMTM3Q96MX0 182 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 SPIN2AQ99865 258 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 SPIN2BQ9BPZ2 258 aa11.65□□□□□ -0.54
USP39-217ENST00000491659 TINAGL1Q9GZM7 467 aaPredicted RBP11.65□□□□□ -0.54
USP39-217ENST00000491659 KBTBD11O94819 623 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 OR2A4O95047 310 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 HRASP01112 189 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 APOA1P02647 267 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 OR9G9P0C7N8 305 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 RORCP51449 518 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 VKORC1L1Q8N0U8 176 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 OR5H2Q8NGV7 314 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 OR2A7Q96R45 310 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 PRR25Q96S07 402 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 GPHA2Q96T91 129 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 RANGRFQ9HD47 186 aaPredicted RBP11.64□□□□□ -0.55
USP39-217ENST00000491659 ANAPC10Q9UM13 185 aa11.64□□□□□ -0.55
USP39-217ENST00000491659 ZNF256Q9Y2P7 627 aaPredicted RBP11.64□□□□□ -0.55
USP39-217ENST00000491659 GABARAPO95166 117 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 ZP3P21754 424 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 CD69Q07108 199 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 C10orf55Q5SWW7 151 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 SPAG16Q8N0X2 631 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 ADAD2Q8NCV1 583 aaKnown RBP11.63□□□□□ -0.55
USP39-217ENST00000491659 TMEM167AQ8TBQ9 72 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 AP3S1Q92572 193 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 USMG5Q96IX5 58 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 TSC22D3Q99576 134 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 AIFM2Q9BRQ8 373 aa11.63□□□□□ -0.55
USP39-217ENST00000491659 TNCP24821 2201 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 SULT1C2O00338 296 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 RBFOX2O43251 390 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP39-217ENST00000491659 NOL3O60936 208 aaKnown RBP11.62□□□□□ -0.55
USP39-217ENST00000491659 LY86O95711 162 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 PMP2P02689 132 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 MAS1LP35410 378 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 BRWD1-AS2P59051 145 aa11.62□□□□□ -0.55
USP39-217ENST00000491659 DEFA5Q01523 94 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms