RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 C10orf55Q5SWW7 151 aa9.85□□□□□ -0.83
USF1-206ENST00000491629 LYG2Q86SG7 212 aa9.85□□□□□ -0.83
USF1-206ENST00000491629 WFDC3Q8IUB2 231 aa9.85□□□□□ -0.83
USF1-206ENST00000491629 FAM89BQ8N5H3 189 aa9.85□□□□□ -0.83
USF1-206ENST00000491629 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.85□□□□□ -0.83
USF1-206ENST00000491629 PHB2Q99623 299 aa9.85□□□□□ -0.83
USF1-206ENST00000491629 C9orf16Q9BUW7 83 aa9.85□□□□□ -0.83
USF1-206ENST00000491629 GGTLC1Q9BX51 225 aa9.85□□□□□ -0.83
USF1-206ENST00000491629 FKBP14Q9NWM8 211 aa9.85□□□□□ -0.83
USF1-206ENST00000491629 TECRQ9NZ01 308 aaKnown RBP9.85□□□□□ -0.83
USF1-206ENST00000491629 MLXQ9UH92 298 aa9.85□□□□□ -0.83
USF1-206ENST00000491629 TMEM213A2RRL7 107 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 FAM223BA6NKX1 122 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 CBLN1P23435 193 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 ST3GAL4Q11206 333 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 TNXAQ16473 311 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 TRIM16LQ309B1 348 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 LAIR2Q6ISS4 152 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 FAM223AQ8IWN6 122 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 GIMAP1Q8WWP7 306 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 KCTD12Q96CX2 325 aaKnown RBP9.84□□□□□ -0.83
USF1-206ENST00000491629 GFI1Q99684 422 aa9.84□□□□□ -0.83
USF1-206ENST00000491629 YTHDF1Q9BYJ9 559 aaKnown RBP9.84□□□□□ -0.83
USF1-206ENST00000491629 RIMS4Q9H426 269 aaPredicted RBP9.84□□□□□ -0.83
USF1-206ENST00000491629 ZNF430Q9H8G1 570 aaPredicted RBP9.84□□□□□ -0.83
USF1-206ENST00000491629 LOC102724200A0A096LPH7 203 aaPredicted RBP9.83□□□□□ -0.84
USF1-206ENST00000491629 LINC00473A8K010 186 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 LGALS9O00182 355 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 SHOXO15266 292 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 OR2J3O76001 311 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 UBE2KP61086 200 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 PRR20EP86478 221 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 PRR20CP86479 221 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 PRR20DP86480 221 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 PRR20BP86481 221 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 PRR20AP86496 221 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 ZNF846Q147U1 533 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 C15orf32Q32M92 178 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 IGSF11Q5DX21 431 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 TTC9CQ8N5M4 171 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 TEX45Q8NA69 505 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 ARHGAP5-AS1Q96IT6 56 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 CCDC140Q96MF4 163 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 OR2D2Q9H210 308 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 C8orf4Q9NR00 106 aa9.83□□□□□ -0.84
USF1-206ENST00000491629 A0A1B0GW64 132 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 IRGMA1A4Y4 181 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 SCAF4O95104 1147 aaKnown RBP9.82□□□□□ -0.84
USF1-206ENST00000491629 IGHV3-23P01764 117 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 SRMP19623 302 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 TAS2R43P59537 309 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 TAGLNQ01995 201 aaKnown RBP9.82□□□□□ -0.84
USF1-206ENST00000491629 ACSM3Q53FZ2 586 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 TM4SF20Q53R12 229 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 PLAC9Q5JTB6 97 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 GLT8D1Q68CQ7 371 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 LGALS9CQ6DKI2 356 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 SLC16A13Q7RTY0 426 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 CEACAM19Q7Z692 300 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 GPHB5Q86YW7 130 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 NECAP1Q8NC96 275 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 SETD9Q8NE22 299 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 SUN5Q8TC36 379 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 CNBD2Q96M20 576 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 PECRQ9BY49 303 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 WDR12Q9GZL7 423 aaKnown RBP9.82□□□□□ -0.84
USF1-206ENST00000491629 C12orf4Q9NQ89 552 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 RABL2AQ9UBK7 228 aaPredicted RBP9.82□□□□□ -0.84
USF1-206ENST00000491629 HSF4Q9ULV5 492 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 S4R3C0 116 aa9.82□□□□□ -0.84
USF1-206ENST00000491629 EFCAB10A6NFE3 127 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 HMX3A6NHT5 357 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 TRDCB7Z8K6 153 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 TEX22C9J3V5 150 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 E7EUB6 86 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 GGCTO75223 188 aaKnown RBP9.81□□□□□ -0.84
USF1-206ENST00000491629 TUSC2O75896 110 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 CRYZL1O95825 349 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 BPNT1O95861 308 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 MAPK3P27361 379 aaPredicted RBP9.81□□□□□ -0.84
USF1-206ENST00000491629 DUTP33316 252 aaKnown RBP9.81□□□□□ -0.84
USF1-206ENST00000491629 TMBIM6P55061 237 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 PLA2G7Q13093 441 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 P2RY14Q15391 338 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 DEFB135Q30KP9 77 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 RBM48Q5RL73 367 aaKnown RBP9.81□□□□□ -0.84
USF1-206ENST00000491629 ZNF57Q68EA5 555 aaPredicted RBP9.81□□□□□ -0.84
USF1-206ENST00000491629 CLVS1Q8IUQ0 354 aaPredicted RBP9.81□□□□□ -0.84
USF1-206ENST00000491629 PACRGLQ8N7B6 248 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 UXS1Q8NBZ7 420 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 OR52B4Q8NGK2 314 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 GATAD1Q8WUU5 269 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 S100ZQ8WXG8 99 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 ACOT12Q8WYK0 555 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 FANCD2OSQ96PS1 177 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 MGAT4AQ9UM21 535 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 KCNK7Q9Y2U2 307 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 PKD1P98161 4303 aa9.81□□□□□ -0.84
USF1-206ENST00000491629 TRBV6-7A0A0A0MS04 114 aa9.8□□□□□ -0.84
USF1-206ENST00000491629 A8MWP6 167 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms