RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CDK10Q15131 360 aa24.15■■□□□ 1.46
LDB1-204ENST00000490751 VAX1Q5SQQ9 334 aa24.15■■□□□ 1.46
LDB1-204ENST00000490751 CROCCP3Q8IVE0 287 aa24.15■■□□□ 1.46
LDB1-204ENST00000490751 SRSF12Q8WXF0 261 aaKnown RBP24.15■■□□□ 1.46
LDB1-204ENST00000490751 HSD17B10Q99714 261 aaKnown RBP24.15■■□□□ 1.46
LDB1-204ENST00000490751 COA4Q9NYJ1 87 aa24.15■■□□□ 1.46
LDB1-204ENST00000490751 A0A0G2JLM5 398 aa24.14■■□□□ 1.45
LDB1-204ENST00000490751 DEFA5Q01523 94 aa24.14■■□□□ 1.45
LDB1-204ENST00000490751 EIF4EBP1Q13541 118 aaPredicted RBP24.14■■□□□ 1.45
LDB1-204ENST00000490751 ACSM6Q6P461 480 aa24.14■■□□□ 1.45
LDB1-204ENST00000490751 TCTEX1D2Q8WW35 142 aa24.14■■□□□ 1.45
LDB1-204ENST00000490751 TINAGL1Q9GZM7 467 aaPredicted RBP24.14■■□□□ 1.45
LDB1-204ENST00000490751 ZNF430Q9H8G1 570 aaPredicted RBP24.14■■□□□ 1.45
LDB1-204ENST00000490751 BRI3O95415 125 aa24.13■■□□□ 1.45
LDB1-204ENST00000490751 FCER2P06734 321 aa24.13■■□□□ 1.45
LDB1-204ENST00000490751 AADACP22760 399 aa24.13■■□□□ 1.45
LDB1-204ENST00000490751 FCGR2CP31995 323 aa24.13■■□□□ 1.45
LDB1-204ENST00000490751 RPS19P39019 145 aaKnown RBP24.13■■□□□ 1.45
LDB1-204ENST00000490751 RANGRFQ9HD47 186 aaPredicted RBP24.13■■□□□ 1.45
LDB1-204ENST00000490751 TAS2R8Q9NYW2 309 aa24.13■■□□□ 1.45
LDB1-204ENST00000490751 CREBL2O60519 120 aaPredicted RBP24.12■■□□□ 1.45
LDB1-204ENST00000490751 OR4S2Q8NH73 311 aa24.12■■□□□ 1.45
LDB1-204ENST00000490751 MPPED1O15442 326 aa24.11■■□□□ 1.45
LDB1-204ENST00000490751 ACTL6BO94805 426 aa24.11■■□□□ 1.45
LDB1-204ENST00000490751 MMD2Q8IY49 270 aa24.11■■□□□ 1.45
LDB1-204ENST00000490751 MFSD4AQ8N468 514 aa24.11■■□□□ 1.45
LDB1-204ENST00000490751 OR13F1Q8NGS4 319 aa24.11■■□□□ 1.45
LDB1-204ENST00000490751 SECTM1Q8WVN6 248 aa24.11■■□□□ 1.45
LDB1-204ENST00000490751 SORL1Q92673 2214 aa24.11■■□□□ 1.45
LDB1-204ENST00000490751 ANKRD34BA5PLL1 514 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 XRCC3O43542 346 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 OR9G9P0C7N8 305 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 CBX5P45973 191 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 UBE2NLQ5JXB2 153 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 ZNF66Q6ZN08 573 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 VKORC1L1Q8N0U8 176 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 ADAD2Q8NCV1 583 aaKnown RBP24.1■■□□□ 1.45
LDB1-204ENST00000490751 SNAPC3Q92966 411 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 S100A16Q96FQ6 103 aaKnown RBP24.1■■□□□ 1.45
LDB1-204ENST00000490751 GPHA2Q96T91 129 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 CCL28Q9NRJ3 127 aa24.1■■□□□ 1.45
LDB1-204ENST00000490751 MEIS3P1A6NDR6 274 aa24.09■■□□□ 1.45
LDB1-204ENST00000490751 PPYP01298 95 aa24.09■■□□□ 1.45
LDB1-204ENST00000490751 ZP3P21754 424 aa24.09■■□□□ 1.45
LDB1-204ENST00000490751 C10orf55Q5SWW7 151 aa24.09■■□□□ 1.45
LDB1-204ENST00000490751 BRWD1-AS2P59051 145 aa24.08■■□□□ 1.45
LDB1-204ENST00000490751 DYRK1AQ13627 763 aa24.08■■□□□ 1.45
LDB1-204ENST00000490751 SAMD12Q8N8I0 201 aa24.08■■□□□ 1.45
LDB1-204ENST00000490751 OR6Q1Q8NGQ2 317 aa24.08■■□□□ 1.45
LDB1-204ENST00000490751 OR4C12Q96R67 309 aa24.08■■□□□ 1.45
LDB1-204ENST00000490751 TNFSF12O43508 249 aa24.07■■□□□ 1.44
LDB1-204ENST00000490751 SPNP16150 400 aa24.07■■□□□ 1.44
LDB1-204ENST00000490751 MSMO1Q15800 293 aa24.07■■□□□ 1.44
LDB1-204ENST00000490751 OR5AP2Q8NGF4 316 aa24.07■■□□□ 1.44
LDB1-204ENST00000490751 USMG5Q96IX5 58 aa24.07■■□□□ 1.44
LDB1-204ENST00000490751 SPIN2AQ99865 258 aa24.07■■□□□ 1.44
LDB1-204ENST00000490751 SPIN2BQ9BPZ2 258 aa24.07■■□□□ 1.44
LDB1-204ENST00000490751 RBMXL2O75526 392 aaKnown RBP24.06■■□□□ 1.44
LDB1-204ENST00000490751 FXYD4P59646 89 aa24.06■■□□□ 1.44
LDB1-204ENST00000490751 ZNF343Q6P1L6 599 aa24.06■■□□□ 1.44
LDB1-204ENST00000490751 VSTM2AQ8TAG5 236 aa24.06■■□□□ 1.44
LDB1-204ENST00000490751 ELOVL1Q9BW60 279 aa24.06■■□□□ 1.44
LDB1-204ENST00000490751 SLC5A7Q9GZV3 580 aa24.06■■□□□ 1.44
LDB1-204ENST00000490751 IFT46Q9NQC8 304 aa24.06■■□□□ 1.44
LDB1-204ENST00000490751 TRIM64CA6NLI5 447 aa24.05■■□□□ 1.44
LDB1-204ENST00000490751 KBTBD11O94819 623 aa24.05■■□□□ 1.44
LDB1-204ENST00000490751 OR2A4O95047 310 aa24.05■■□□□ 1.44
LDB1-204ENST00000490751 TMEM69Q5SWH9 247 aa24.05■■□□□ 1.44
LDB1-204ENST00000490751 PUSL1Q8N0Z8 303 aaKnown RBP24.05■■□□□ 1.44
LDB1-204ENST00000490751 OR2A7Q96R45 310 aa24.05■■□□□ 1.44
LDB1-204ENST00000490751 PEF1Q9UBV8 284 aaKnown RBP24.05■■□□□ 1.44
LDB1-204ENST00000490751 PRH1P02810 166 aa24.04■■□□□ 1.44
LDB1-204ENST00000490751 KIR2DS2P43631 304 aa24.04■■□□□ 1.44
LDB1-204ENST00000490751 TAS2R20P59543 309 aa24.04■■□□□ 1.44
LDB1-204ENST00000490751 ZBTB34Q8NCN2 500 aa24.04■■□□□ 1.44
LDB1-204ENST00000490751 TMEM167AQ8TBQ9 72 aa24.04■■□□□ 1.44
LDB1-204ENST00000490751 SLC25A46Q96AG3 418 aa24.04■■□□□ 1.44
LDB1-204ENST00000490751 TRBV12-3P01733 135 aa24.03■■□□□ 1.44
LDB1-204ENST00000490751 GP9P14770 177 aa24.03■■□□□ 1.44
LDB1-204ENST00000490751 NCS1P62166 190 aa24.03■■□□□ 1.44
LDB1-204ENST00000490751 RHOGP84095 191 aa24.03■■□□□ 1.44
LDB1-204ENST00000490751 HAPLN4Q86UW8 402 aa24.03■■□□□ 1.44
LDB1-204ENST00000490751 GIMAP1Q8WWP7 306 aa24.03■■□□□ 1.44
LDB1-204ENST00000490751 RSRP1Q9BUV0 290 aa24.03■■□□□ 1.44
LDB1-204ENST00000490751 FUNDC2Q9BWH2 189 aa24.03■■□□□ 1.44
LDB1-204ENST00000490751 SMAD5-AS1Q9Y6J3 95 aa24.03■■□□□ 1.44
LDB1-204ENST00000490751 HRASP01112 189 aa24.02■■□□□ 1.44
LDB1-204ENST00000490751 NHLRC4P0CG21 123 aaPredicted RBP24.02■■□□□ 1.44
LDB1-204ENST00000490751 ZNF45Q02386 682 aa24.02■■□□□ 1.44
LDB1-204ENST00000490751 KLF5Q13887 457 aaPredicted RBP24.02■■□□□ 1.44
LDB1-204ENST00000490751 SSX9Q7RTT3 188 aa24.02■■□□□ 1.44
LDB1-204ENST00000490751 TMEM17Q86X19 198 aa24.02■■□□□ 1.44
LDB1-204ENST00000490751 TTC9CQ8N5M4 171 aa24.02■■□□□ 1.44
LDB1-204ENST00000490751 KCTD12Q96CX2 325 aaKnown RBP24.02■■□□□ 1.44
LDB1-204ENST00000490751 AKIP1Q9NQ31 210 aa24.02■■□□□ 1.44
LDB1-204ENST00000490751 HMX3A6NHT5 357 aa24.01■■□□□ 1.43
LDB1-204ENST00000490751 SPAG16Q8N0X2 631 aa24.01■■□□□ 1.43
LDB1-204ENST00000490751 EHFQ9NZC4 300 aa24.01■■□□□ 1.43
LDB1-204ENST00000490751 ANAPC10Q9UM13 185 aa24.01■■□□□ 1.43
LDB1-204ENST00000490751 FAM223BA6NKX1 122 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms